FC868546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 58 TQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 ++ +YG +GE Y DN LRF C+ L+ + ++ Y D++ +DW T++IP LK + VF IHN+AYQG F A D GL P+ F + D ++ Y K+N +K IL +D++ TVS Y +E ++ E G LD + Sbjct: 94 SRDHLYGTASGE-YPDNHLRFAFFCRGVLDLLKKMD----------YRPDIIH-CHDWQTAMIPLILKKEKGDDLFFSKTGTVFTIHNLAYQGLFPKEAMVDMGL--DPSLF--TIDCLEYYG------KVNLIKGAILTADVINTVSETYCREILTPES-GDGLDGV 238
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ANATD (Glycogen synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12 Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFE-DFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y D+ RF +A EA L+ + D++ V NDWHTS+IP LKA Y + K + IHN+ YQG F E + LL+LP ++ S D + Y+ I+++K GI+ SD V+TVS YA E Sbjct: 101 YYDDGERFSFFSRAVCEAVYHLD----------FDVDIIHV-NDWHTSVIPVLLKAHYGHSDKHNKIKTILTIHNLKYQGIFPKEVMYDLLSLPDEYFSE-DKLKFYD------AISFLKGGIIYSDKVVTVSRTYANE 221
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_CALS8 (Glycogen synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.137e-12 Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFE-DFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y D+ RF +A EA I +L+ + D++ V NDWHTS+IP LKA Y ++ K V IHN+ YQG F E + LL+LP ++ ++ F D I+++K GI+ +D V+TVS YA E Sbjct: 101 YYDDGERFSYFSRAVCEA--IYHLD--------FDVDIIHV-NDWHTSVIPVLLKAHYSHSPKHQKIKTVLTIHNLRYQGVFPKEVMYDLLSLPDEYFDENKLKFYDA---------ISFLKGGIIFADKVVTVSKTYANE 221
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_TREDE (Glycogen synthase OS=Treponema denticola GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.063e-11 Identity = 57/183 (31.15%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 16 FVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRG-RKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 F+DH + + +YG D+ DN RF +L AA + R + DVV A+DW L+P L+ K +K+ VF IHN+ YQG ++ F D GL D+ D Y +IN++KA ++ SDM+ TVSP YA+E + + G +D I Sbjct: 86 FIDHEQAFGR------DGVYGSAFEPDFSDNTKRFSLLAHAAFQVCR----------KQAWIPDVVH-AHDWAAGLVPVLLRFTEK-NTEFKNTASVFTIHNMGYQGVYSKHTFPDTGL-----------DWNDFYTTGFEDWDRINFLKAALVSSDMLTTVSPSYAEE-IKRPEFGFRMDGI 238
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ERWCT (Glycogen synthase OS=Erwinia carotovora subsp. atroseptica GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.063e-11 Identity = 53/149 (35.57%), Postives = 71/149 (47.65%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE-TVSGEDXGVE 540 Y DN LRF +L E L+ Y + A+DWH L YL A +P AK VF +HN+AYQG FA L+LP+ DF Y G +I+++KAG+ +D + TVSP YA E T+ G+E Sbjct: 103 YADNYLRFALLGWMGCEMACGLD---------HYWRPDIVHAHDWHAGLTCAYLAARNRP------AKSVFTVHNLAYQGLFAAGHMANLHLPS------DFFQVYGLEFYG-QISYLKAGLFYADHITTVSPTYAHEITLPAYGYGME 229
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_BORPD (Glycogen synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.063e-11 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 70 IYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 +Y G+ Y DN +RF L AA+ L G D++ A DWH L+P ++A G+ + K V +HN+A+QG F E G + +P + + DG + GR IN+MKAG+ +D + TVS +YA+E ++ E Sbjct: 99 LYLDEQGQPYADNAVRFAALAHAAMRVAAGL--------PGMRRPDILH-AQDWHAGLVPLLVRAA----GL-RYVKTVLTVHNLAFQGSFELECAGQIGVPGAYCTD----DGAR--LHGR-INFMKAGLRYADRITTVSRNYAREIMTPE 229
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_SULSY (Glycogen synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=glgA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 70 IYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 +YGP G DY DN +RF C A +E + NLN D++ V NDW T+LIP Y + + V IHN+AYQG F LNL + ++ Y+K +N++K GI+ S + TVSP YA+E ++ + G LD + Sbjct: 97 LYGPPEG-DYPDNDIRFGSFCYAVMEFIKRENLNP----------DLIHV-NDWQTALIPVLNYHKYNNHHV----RTVITIHNLAYQGIFDKFAIERLNLGWDL-FHMEALEYYDK------VNFLKGGIVFSSAITTVSPTYAKE-ITFPEYGYGLDGV 233
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_PASMU (Glycogen synthase OS=Pasteurella multocida GN=glgA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 54/144 (37.50%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 94 DYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 DY DN RF +L A E L+ + DVV A+DWH L YL +P AK VF IHN+AYQG+FA+ + LPA +DG + G +I+++KAG+ SD V VSP YA+E + E Sbjct: 102 DYADNYKRFALLGWVAAELATGLD--------SWWHADVVH-AHDWHAGLASAYLFNKGRP------AKSVFTIHNLAYQGQFAYHHLVEIGLPA----GMFHVDGLE--LHG-QISYLKAGLYYSDAVTAVSPTYAKEITTPE 223
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_AERHH (Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=glgA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 44/141 (31.21%), Postives = 66/141 (46.81%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVS 519 Y DN RF L AAL A L + D+V NDWHT L+P LK + ++ + V IHN A+QG F + F + A ++ + G+ +N +K G+L +D + VSP+YA E ++ Sbjct: 111 YPDNGERFAFLAAAALHASEQL----------AFAPDIVH-CNDWHTGLLPLLLKTRHAHNPFFQHTRSVISIHNAAFQGVFERQQFWAVPEIADYEQRISYDYGH--------VNLLKCGVLYADKINAVSPNYASELLT 232
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 88 GEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 G+D+ DN RF C+A + L ++ F + D++ NDW T LIP +L + +F IHN+AYQG F+ + F L LP+ + S ++ YN +I+++K G++ +D + TVSP YA+E ++ E G LD + Sbjct: 105 GQDWPDNAARFTTFCRA------VATLANSPEFD--WQPDLIH-CNDWQTGLIPPFLAPLRSRPA------TLFTIHNLAYQGVFSRQQFDALELPSAWWSP-AALEFYN------QISFIKGGLVFADWLTTVSPTYAKEILTPE-FGCGLDGV 236 The following BLAST results are available for this feature:
BLAST of FC868546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868546 ID=FC868546; Name=FC868546; organism=Citrus clementina; type=EST; length=552bpback to top |