FC868546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ERWT9 (Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11 Identity = 50/143 (34.97%), Postives = 66/143 (46.15%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 Y DN LRF +L + E L+ P+ V A+DWH L YL A +P AK VF +HN+AYQG F + LP F D Y G +I+++KAG+ +D V VSP YA+E E Sbjct: 103 YSDNYLRFALLGWVSCELACGLD---------PWWRPEVVHAHDWHAGLSCAYLAARGRP------AKSVFTVHNLAYQGLFNARHMEQIQLP------HSFFDVYGMEFHG-QISYLKAGLFYADHVTAVSPTYAREITQPE 223
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_STRA3 (Glycogen synthase OS=Streptococcus agalactiae serotype III GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 57/154 (37.01%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 94 DYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 D+ D + RF AALE +N + DV+ V +D+HT++IP LK Y Y + + VF IHNI +QG+F E G L + A+ + DG + +NWMKA IL SD V TVSP YA E + + G LD I Sbjct: 101 DWDDGE-RFAYFQLAALELMEKIN----------FIPDVLHV-HDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQFGPEMLGDLFGVGAE-----RYEDGTLR--WNNCLNWMKAAILYSDRVTTVSPSYANE-IKTPEFGKGLDQI 234
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 57/178 (32.02%), Postives = 81/178 (45.51%), Query Frame = 1 Query: 19 VDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 +D P A+ G Y TG DY DN RF L AA E + + D+V V +DW T+L P Y++ G V IHNIA+QG+F F L LP S+ F++ Y + ++K G+ + + TVSP YAQE ++ E G+ LD + Sbjct: 83 LDQPALYARDGGP-----YLDSTGRDYPDNFRRFAALSLAAAEI-------AGNGIIPNWKPDIVHV-HDWQTALTPVYMRF-----GPAPDLPTVMTIHNIAFQGQFGASVFPELALPPDAFST-QFVEYYG------DVGFLKGGLQTASAITTVSPSYAQEILTPE-FGMGLDGL 234
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_EDWI9 (Glycogen synthase OS=Edwardsiella ictaluri (strain 93-146) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11 Identity = 54/143 (37.76%), Postives = 66/143 (46.15%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 Y DN LRF +L A E L N + P+ V A+DWH L YL A P A+ VF +HN+AYQG F L LP F Y G+ I++MKAG+ +D V TVSP YAQE E Sbjct: 103 YGDNHLRFALLGWIAAE----LACNCD-----PFWRPQVVHAHDWHAGLACAYLAARGNP------ARSVFTVHNLAYQGLFNARHLDELALPHHF------FQIYGLEFHGQ-ISFMKAGLYYADHVTTVSPTYAQEITHPE 223
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11 Identity = 40/96 (41.67%), Postives = 51/96 (53.12%), Query Frame = 1 Query: 223 NDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 +DW T++I LK Y+ G YK+ K VF IHN+ YQG F E G L F S + G +N+MK G+ SD + TVSP YAQE Sbjct: 132 HDWQTAMISYLLKTQYQHHGFYKNIKTVFTIHNLKYQGVFPQEVLGDL-----FNGSQQHFNEGGVEYHG-NVNYMKGGLNFSDYITTVSPTYAQE 221
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERP3 (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11 Identity = 49/138 (35.51%), Postives = 68/138 (49.28%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN RF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ L LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYQRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSAHHLSELQLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_LACS1 (Glycogen synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11 Identity = 50/118 (42.37%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 205 DVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 D++ V ND+HT+ IP LK Y Y+S K V IHN+ +QG + E G L NL A + + DG VR +N+MK GIL +D V TVSP YA E + E G LD I Sbjct: 128 DILHV-NDYHTAFIPFLLKEKYGWINAYQSIKTVLTIHNLQFQGEYGREVLGELFNLDASY-----YDDG---TVRFDTAVNFMKTGILYADKVNTVSPTYASE-IQTEAFGQGLDEI 235
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ANOFW (Glycogen synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11 Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y D + RF C+A L+ +++ N V +DWHT +IP L+ Y Y K VF IHN+ +QG F E G LLNL ++ S + ++ Y +++MK ++ + ++ TVSP Y +E Sbjct: 102 YDDGE-RFSYFCRAVLDCLPVIDFQPN-----------VIHCHDWHTGMIPFLLREEYMRNSFYAQMKTVFTIHNLQFQGIFPREILGDLLNLSDRY-FSIEHLEFYG------HVSFMKGALVSAHLITTVSPTYKEE 221
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_VIBFM (Glycogen synthase OS=Vibrio fischeri (strain MJ11) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.274e-11 Identity = 45/142 (31.69%), Postives = 69/142 (48.59%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVS 519 Y DN RF A L+ P++LN D++ V NDWHT LIP LK Y Y + V IHN ++G F +++ L ++FKS F + ++ +KAG+ +D + VSP+YA+E ++ Sbjct: 108 YADNGERFAFFSAATLDLLPKLLNKKP----------DIIHV-NDWHTGLIPYLLKKRYAENEFYHQTRSVLSIHNAVFKGIFHYDEIACL---SEFKSHF----VPEASISHTHVSMLKAGVQCADKINAVSPNYAKELLT 231
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_SHISS (Glycogen synthase OS=Shigella sonnei (strain Ss046) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.274e-11 Identity = 47/138 (34.06%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L E L+ P+ V A+DWH L P YL A +P AK VF +HN+AYQG F + LP + F + + G +I+++KAG+ +D + VSP YA+E Sbjct: 103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYARE 218 The following BLAST results are available for this feature:
BLAST of FC868546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868546 ID=FC868546; Name=FC868546; organism=Citrus clementina; type=EST; length=552bpback to top |