FC868552

Overview
NameFC868552
Unique NameFC868552
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9383 contig Ccv1_Contig9383:26..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.078e-42
Identity = 83/189 (43.92%), Postives = 120/189 (63.49%), Query Frame = 1
Query:   76 NMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            N AA L G N ++I+ + +P +   +VL+++  VG+CGSDV    T      V+ +P+VIGHE AG + KVG +V +L  GDRVA+EP   C  C+ CK G+YNLC E +   S    G L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I   + ++I+G+GPIG++  + A+A GA
Sbjct:    4 NYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGA 192          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: XYLD_RHIME (Putative D-xylulose reductase OS=Rhizobium meliloti GN=R02526 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.897e-42
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 1
Query:  139 LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFG 639
            L P DVL+ ++ VGVCGSDVH+    ++  FVV EPM++GHE AGV+ +VGS+V+ L  GDRV +EPGI        K G YN+ P  +   +PPVHGCL  +VVHPA   ++LPD+VS  EGAM EP ++GV A  RA I P     +MG+GPIG++T L A A G
Sbjct:   24 LSPTDVLIGIRTVGVCGSDVHYYTHGKIGPFVVNEPMILGHEAAGVVLEVGSQVRHLKKGDRVCMEPGIPDLSSRSSKLGIYNVDPSVRFWATPPVHGCLTPEVVHPAAFTYRLPDHVSFAEGAMVEPFAIGVQAALRAGIRPGDVGAVMGAGPIGMMTALAALAGG 190          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.647e-39
Identity = 82/190 (43.16%), Postives = 118/190 (62.11%), Query Frame = 1
Query:   76 NMAAWLMGVNTLKIQPLELPSL-GPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            N A  L  V  + I+   +P++  P+ V + +KA G+CGSD+H+ ++  +  +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K GRYNLCP      +PP+ G L    + P D   KLP+ VS EEGA  EPLSVGVH+ + A +   T V++ G+GP+GL+T   ARAFGA
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGRYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGA 195          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.173e-39
Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = 1
Query:   76 NMAAWLMGVNTLKIQPLELPSL-GPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            N A  L  V  + I+   +P++  P+ V + +KA G+CGSD+H+ ++  +  +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K G YNLCP      +PP+ G L    + P D   KLP+ VS EEGA  EPLSVGVH+ + A +   T V++ G+GP+GL+T   ARAFGA
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGA 195          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: XYLD_AGRT5 (Putative D-xylulose reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu4318 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.067e-38
Identity = 79/167 (47.31%), Postives = 105/167 (62.87%), Query Frame = 1
Query:  139 LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFG 639
            LGP DV +R   VG+CGSDVH+    ++  FVV  PMV+GHE +G + + GS+V  L  GDRV +EPGI        K G YN+ P  +   +PP+HGCL  +V+HPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    ++ G+GPIG++  L A A G
Sbjct:   28 LGPKDVRIRTHTVGICGSDVHYYTHGKIGHFVVNAPMVLGHEASGTVIETGSDVTHLKIGDRVCMEPGIPDPTSRASKLGIYNVDPAVRFWATPPIHGCLTPEVIHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAALRARIQPGDIAVVTGAGPIGMMVALAALAGG 194          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.378e-38
Identity = 77/159 (48.43%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  139 LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVT 615
            LG  DV +++  VG+CGSDVH+ +  R+  FVV EPMV+GHE +GVI   G  VK L  GDRV +EPGI   Q    + G YNL P  +   +PP+ GCL   V+HPA   FKLPDNVS  +GAM EPL++G+ +  +A I P    L++G+G IG++T
Sbjct:   25 LGDDDVEIKIHTVGICGSDVHYYQHGRIGPFVVDEPMVLGHEASGVITAAGKNVKHLKVGDRVCMEPGIPDLQSPQSRAGIYNLDPAVRFWATPPIDGCLRESVIHPAAFTFKLPDNVSFAQGAMVEPLAIGMQSATKAGIKPGDIGLVIGAGTIGIIT 183          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.918e-38
Identity = 80/178 (44.94%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  109 LKIQPLELP-SLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFG 639
            L ++ + LP  +GP DV + +  VGVCGSDVH+     +  +VV+ PMV+GHE AG + + G+ V+T   GDRV +EPG+        K G YN+ P+     +PPVHG LA   VHPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    +++G GPIG++  L A A G
Sbjct:   12 LSLREIALPLDVGPDDVKIAIHTVGVCGSDVHYYTHGAIGSYVVRAPMVLGHEAAGTVVETGANVETFKAGDRVCMEPGVPNLSSRATKLGIYNVDPDVSFWATPPVHGVLAPYAVHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAASRARIVPGDVAVVVGCGPIGIMIALAALAGG 189          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.857e-37
Identity = 78/166 (46.99%), Postives = 105/166 (63.25%), Query Frame = 1
Query:  145 PYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            P +V++++KA G+CGSD+H+    R+A++VV+ PMV+GHE +G++  +G  VKTL  GDRVALEPGI        K GRYNL P  K   +PP  G L        D  +KLPD+VS EEGA+ EPLSV +HA + A I      ++ G+GPIGL+    A  FGA
Sbjct:   31 PNEVIIQIKATGICGSDIHYYTHGRIANYVVESPMVLGHESSGIVALIGENVKTLKVGDRVALEPGIPDRFSPEMKEGRYNLDPNLKFAATPPFDGTLTKYYKTMKDFVYKLPDDVSFEEGALIEPLSVAIHANKLAKIKFGARCVVFGAGPIGLLAGKVASVFGA 196          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.305e-36
Identity = 78/194 (40.21%), Postives = 117/194 (60.31%), Query Frame = 1
Query:   76 NMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVV-KEP---MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPP-VHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            N  A L    T+KI   E+P     +VL++++ VG+CGSDVH  ++     F+  K+P   + +GHECAG +  VGS V+   PGDRV +EPG+ C  C YC  G+YN+CP+   + + P   G L + + HP    +KLPDN+   EGA+ EP +VG+HA   A++ P   ++I+G+G IGL+T+   +  GA
Sbjct:    3 NSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFES---GPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGA 193          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.958e-36
Identity = 82/197 (41.62%), Postives = 113/197 (57.36%), Query Frame = 1
Query:   76 NMAAWLMGVNTLKIQPLELPSLG-PYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE-------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            N +  L  ++ +  +  + P +  P DVLV++K  G+CGSD+HF    R+ +FV+ +PMV+GHE AG + +VG  V +L  GD VA+EPGI     D  K G YNLCP        +   G P   G L      P D   KLPD+VSLE GA+ EPLSVGVHA +  ++     V + G+GP+GL+    A+ FGA
Sbjct:    4 NPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVSLELGALVEPLSVGVHASKLGSVAFGDYVAVFGAGPVGLLAAAVAKTFGA 200          
The following BLAST results are available for this feature:
BLAST of FC868552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
DHSO_BOMMO2.078e-4243.92Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
XYLD_RHIME7.897e-4250.90Putative D-xylulose reductase OS=Rhizobium melilot... [more]
DHSO1_YEAST1.647e-3943.16Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO2_YEAST8.173e-3942.63Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
XYLD_AGRT51.067e-3847.31Putative D-xylulose reductase OS=Agrobacterium tum... [more]
XYLD_MORMO2.378e-3848.43D-xylulose reductase OS=Morganella morganii PE=1 S... [more]
XYLD_RHILO6.918e-3844.94Putative D-xylulose reductase OS=Rhizobium loti GN... [more]
XYL2_YEAST5.857e-3746.99D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
YDJJ_ECOLI1.305e-3640.21Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
XYL2_PICST4.958e-3641.62D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]

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Properties
Property NameValue
Genbank descriptionC31001G11EF AbioticL1 Citrus clementina cDNA clone C31001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868552 ID=FC868552; Name=FC868552; organism=Citrus clementina; type=EST; length=643bp
TGTTTTTGAAGAGTTCAAGCAAATATGGGCAAGGGAGGGATGTCACAAGG
AGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTG
TCAACACCCTCAAGATTCAGCCTTTGGAGCTTCCTTCTCTGGGACCTTAT
GATGTTTTAGTCAGGATGAAAGCCGTTGGTGTTTGTGGAAGTGATGTGCA
TTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTATGG
TGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTG
AAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAGCTG
CTGGCAATGTGATTACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGT
CGAAAGGTCTTGGAAGTCCGCCAGTTCATGGTTGTCTGGCTAATCAGGTG
GTGCATCCTGCAGACCTATGTTTTAAGCTGCCCGACAATGTCAGCCTGGA
GGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCCTGCCGCC
GTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGATCAGGGCCC
ATAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTC
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