FC868552

Overview
NameFC868552
Unique NameFC868552
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11
Identity = 53/199 (26.63%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  115 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCL-----ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            I+ +E+     ++V ++M AVG+CG+D H +        V   P+++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C ++  + +P                P+H  L     +   V   +   K+     LE+  +  C   +    A   A + P +   + G G +GL  ++G +A GA
Sbjct:   24 IEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKN-DVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGA 217          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 60/211 (28.44%), Postives = 94/211 (44.55%), Query Frame = 1
Query:   85 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPP----VHGCLANQVVH------------PADLCF-KLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            AW  G   L I+ +E+     ++V V++ A  VC +D +   TL  AD     P+++GHE AG++E VG  V    PGD V       C +C +C   + NLC +   ++G G  P       C   QV+H             AD+   K+  +  L++  +   L  GV      A   A + P +   + G G +GL  ++G +  GA
Sbjct:   12 AWEAG-KPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAY---TLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVMPDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCL---LGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGA 215          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 50/186 (26.88%), Postives = 91/186 (48.92%), Query Frame = 1
Query:   82 AAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNV--SLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGAR 630
            AA +   +T++++  +L  L   + L+ M+  GVC +D+H    ++  DF  +   + GHE  G++++VG  V +L  GDR ++      C  C+YC  G   LC   +  G   V G +A + +  AD   K+PD +  ++     C  ++    A + + I P   + I G G +G + +  A+
Sbjct:    3 AAVITKDHTIEVKDTKLRPLKYGEALLEMEYCGVCHTDLH----VKNGDFGDETGRITGHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNVENAGY-TVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTT-YKAVKVSQIQPGQWLAIYGLGGLGNLALQYAK 182          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 52/172 (30.23%), Postives = 83/172 (48.26%), Query Frame = 1
Query:  151 DVLVRMKAVGVCGSDVHFLKTLRLADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPP-----VHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFG 639
            DV +++   GVC SD+H +K     D+     P+V GHE AG++ KVGS V     GDRV +   + SC +C+ C+    + CP+     + P       G  ++ VV       + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +AFG
Sbjct:   32 DVTLKILYCGVCHSDLHTVKN----DWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNSPYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFG 199          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 59/205 (28.78%), Postives = 90/205 (43.90%), Query Frame = 1
Query:   58 EDGEEVNMAAWLMGVNTLKIQPLELP--SLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLC-PESKGLGSPPVHGCLA-----NQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFG 639
            E    V    W    N+    P      + G  DV  R+   GVC SD+H +K       V   P+V GHE  G++ +VGS+V+ +  GD+V +   + SC QCD C     N C  +    G+P + G +A     + +V       + P+N  L+ GA  +C  ++            P   V + G G +G V +  A+AFG
Sbjct:    6 ETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKN---EWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFG 207          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 56/182 (30.77%), Postives = 83/182 (45.60%), Query Frame = 1
Query:  151 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLGAR 630
            +VL+++   GVC +D     TL   D     P+V+GHE AGV+ +VG  V ++ PGD V       C +C++C+ G+ NLC      + KGL           G P  H  GC       VV    L    P+        +   ++ G+ A    A + P+ +V + G G IGL  + GAR
Sbjct:   29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGAR 207          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 58/203 (28.57%), Postives = 89/203 (43.84%), Query Frame = 1
Query:  109 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPPVH----GCLANQVVH------------PADLCF-KLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            L I+ +E+     ++V +++ A GVC +D     TL  AD     P+V+GHE AG++E VG  V     GD V       C +C +CK G+ NLC +   ++G G  P       C   Q+ H             AD+   K+ +   LE+  +   L  G+      A   A +   +   + G G +GL   LG +  GA
Sbjct:   23 LVIEDIEVAPPKAHEVRIKITATGVCHTDAF---TLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCL---LGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGA 219          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 54/203 (26.60%), Postives = 86/203 (42.36%), Query Frame = 1
Query:  115 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLS----VGV-------HACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            I+ +E+     ++V ++M A G+C SD H +    +A      P++ GHE AG++E +G  V T+ PGD+V       C +C  CK    NLC   K L  P                P+H  L           + + D +S+ +     PL     VG         A + A +   +   + G G +GL  ++G +A GA
Sbjct:   24 IEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL----PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGA 216          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11
Identity = 56/200 (28.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  109 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCP---ESKGLGSPP----VHGCLANQVVHPADLC----FKLPDNVSLEEGAMCEPL-SVGVHAC----------RRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            L I+ +++     ++V V++    VC +D +   TL   D     P+V+GHE AG++E +G  V  + PGD V L     C +C +C+ G+ NLC    E++G G  P       C    ++H         + +  ++SL   +   PL S+ +  C            A +   + V ++G G +GL  M GA A GA
Sbjct:   22 LSIEDIQVAPPKAHEVRVKVDWSAVCHTDAY---TLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLMPDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGA 218          
BLAST of FC868552 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 58/192 (30.21%), Postives = 90/192 (46.88%), Query Frame = 1
Query:  112 KIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADF-VVKEPMVIGHECAGVIEKVGSEVKTLVP-GDRVAL-EPGISCWQCDYCKGGRYNLC----------PESKGLGSPPVHGCLANQVVHPADLCFKLPDNV--SLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGA 642
            K+   +    G +DV V ++A G+CGSD H    + + ++  V E  ++GHE  G + KVGS+  T V  GDRV +    ++C++C+ CK      C          P   G  S    G  A+ V        ++P+N+   L    +C  ++V      R   GP   V I+G G IG + +L A+A GA
Sbjct:   22 KLVSFDPKPFGDHDVDVEIEACGICGSDFH----IAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYIS---QGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITV-FSPLLRNGCGPGKRVGIVGIGGIGHMGILLAKAMGA 205          
The following BLAST results are available for this feature:
BLAST of FC868552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
ADH1A_HUMAN1.453e-1126.63Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
ADHX_UROHA3.236e-1128.44Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADH1_ZYMMO4.227e-1126.88Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
MTDH1_STYHU5.520e-1130.23Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
GEDH1_OCIBA5.520e-1128.78Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
FRMA_ECOSM5.520e-1130.77S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADHX_DROME5.520e-1128.57Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH1S_HORSE5.520e-1126.60Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
FADH1_SCHPO7.209e-1128.00Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH7_YEAST9.416e-1130.21NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC31001G11EF AbioticL1 Citrus clementina cDNA clone C31001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868552 ID=FC868552; Name=FC868552; organism=Citrus clementina; type=EST; length=643bp
TGTTTTTGAAGAGTTCAAGCAAATATGGGCAAGGGAGGGATGTCACAAGG
AGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTG
TCAACACCCTCAAGATTCAGCCTTTGGAGCTTCCTTCTCTGGGACCTTAT
GATGTTTTAGTCAGGATGAAAGCCGTTGGTGTTTGTGGAAGTGATGTGCA
TTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTATGG
TGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTG
AAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAGCTG
CTGGCAATGTGATTACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGT
CGAAAGGTCTTGGAAGTCCGCCAGTTCATGGTTGTCTGGCTAATCAGGTG
GTGCATCCTGCAGACCTATGTTTTAAGCTGCCCGACAATGTCAGCCTGGA
GGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCCTGCCGCC
GTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGATCAGGGCCC
ATAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTC
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