FC868554

Overview
NameFC868554
Unique NameFC868554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:111..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 3.172e-33
Identity = 78/205 (38.05%), Postives = 107/205 (52.20%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDA 655
            L  NFY  +CP     +K  VK           S LR  FHDC V  CD S+LLD T     E+    +    R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRA 204          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.410e-33
Identity = 83/209 (39.71%), Postives = 117/209 (55.98%), Query Frame = 2
Query:   44 LVMNFYK--DTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 649
            LV ++YK  +TC  AE  I+ QV+  YK   + A   LR ++ DC V  CD S+LL       SE+   ++ G+  F  I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++  LP  + S+   L  F + G+D   +  LLG+HS+G+THC  +V RLY      + DP +N   V  + + CP
Sbjct:   35 LVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPN---SERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCP 238          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.066e-33
Identity = 78/208 (37.50%), Postives = 112/208 (53.85%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCP 649
            L   FY  +CP+A++I++  V   ++       S LR  FHDC V+ CDAS+LLDS+   +SEK  + +    R F  IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCP 240          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.066e-33
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---------PEVDPAL 610
            L   FY ++CP AE I++  V+  + R  +   +  R  FHDC VQ CDASLL+D T   LSEK    +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+          P +DP L
Sbjct:   23 LKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTL 220          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.066e-33
Identity = 76/208 (36.54%), Postives = 110/208 (52.88%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCP 649
            L   FY+ +CP+AE+I++  V     R    A S +R  FHDC VQ CD SLLLD++   ++EK  +  S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +        +P  N++ + ++ RF   G+D   +VAL GSH++G + C     RLY +      D  L   +  ++  +CP
Sbjct:   36 LFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCP 243          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 9.228e-33
Identity = 78/222 (35.14%), Postives = 116/222 (52.25%), Query Frame = 2
Query:    5 LRSALASNEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY--------PEVDPALNPDHVPHMLHKC 646
            L +A A       L   FY ++CP  E ++++++        + A   LR  FHDC V+ CD S+LLDS   + +EK+   +  +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q LP    + + + + FAA  +D   LV L   H++G +HC     RLY         ++DP L   ++  +  KC
Sbjct:   11 LLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKC 231          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.205e-32
Identity = 76/208 (36.54%), Postives = 112/208 (53.85%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCP 649
            L  +FY+ +CP+AE+I++  V   ++R    A S +R  FHDC VQ CD SLLLD++   ++EK  +  S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +      + LP+ ++    +  RF+  G++   LVAL GSH++G + C     RLY +      D  L   +   +  +CP
Sbjct:   35 LFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCP 242          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32
Identity = 83/210 (39.52%), Postives = 116/210 (55.24%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR-KTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV-VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPD 652
            L MNFY ++CP AEDI+++ V    + +++ A   LR  +HDC V+ CDASLLLDS   K +SEKE   +  +  F  I+ IK  +E+ CP  VSCADIL L+ RD V      P   + TGR DGR S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSD 255          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32
Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 2
Query:   41 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 586
            GL M +Y  +CP AE I+K  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL G+H++G   C     RL
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL 205          
BLAST of FC868554 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32
Identity = 73/203 (35.96%), Postives = 115/203 (56.65%), Query Frame = 2
Query:   44 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLS-EKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHM 634
            L M FY  TCP AE I+++ V        + A   +R  FHDC V+ CD S+L+++T      EK    +  +R F +I+ +K A+E +CPG+VSCADI+ L+ RD +VA+GGP   + TGRRDGR S        +P    + + ++  F   G+D   LV L G+H++G +HC    +RL+      + DP+L+ ++  ++
Sbjct:   25 LKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNL 227          
The following BLAST results are available for this feature:
BLAST of FC868554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PERP7_BRARA3.172e-3338.05Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER61_ARATH5.410e-3339.71Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER72_ARATH7.066e-3337.50Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER28_ARATH7.066e-3340.40Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER15_ARATH7.066e-3336.54Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER1_ORYSJ9.228e-3335.14Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER14_ARATH1.205e-3236.54Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER24_ARATH1.574e-3239.52Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER47_ARATH2.685e-3238.46Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER39_ARATH2.685e-3235.96Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31001H01EF AbioticL1 Citrus clementina cDNA clone C31001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868554 ID=FC868554; Name=FC868554; organism=Citrus clementina; type=EST; length=666bp
GTCTCTGAGGTCTGCTTTGGCATCAAATGAAGAGGACCCAGGTCTTGTTA
TGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAA
CAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCT
TAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGC
TTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGC
TTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGA
AAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCG
GTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACA
GGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCT
CCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCA
TTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTT
GGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGA
CCCTGCACTGAACCCTGACCACGTTCCGCATATGCTCCATAAGTGTCCTG
ATGCAATCCCAGACCC
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