FC868560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_PARUW (L-threonine 3-dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=tdh PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28 Identity = 78/194 (40.21%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 118 LKIQPLELPS-LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ L +PS + +VL++ +CG+DVH K A V P+VIGHE G I + G VK G+RV E I C QC C+ GR ++C +KGLG + GC A V PA+ F LP ++S + GA+ +P VH N+ E +VLI G+GPIG++ A+ GA IVI DV+DYRL + Sbjct: 13 LWMENLPIPSHVKDDEVLIKTIKTSICGTDVHIYKWDAWAQKNVPVPLVIGHEFIGEIAEFGKNVKGFKIGERVCGEGHIVCNQCPNCRMGRKHVCMHTKGLGY-HISGCFAEYFVLPAENVFSLPPSISDDLGAIFDPYGNAVHTTLAFNLIGE-DVLITGAGPIGIMAAAIAKQAGARHIVITDVNDYRLDL 204
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHEAM (L-threonine 3-dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.421e-28 Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L++++ +CG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + A+ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTTGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_BURXL (L-threonine 3-dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=tdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.421e-28 Identity = 70/193 (36.27%), Postives = 107/193 (55.44%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L + ++ P +G DV++R+ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P +S + A+ +P H N+ E +VLI G+GPIG++ + A+ GA +VI DV+DYRL + Sbjct: 13 LTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_BURPP (L-threonine 3-dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=tdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.421e-28 Identity = 70/193 (36.27%), Postives = 107/193 (55.44%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L + ++ P +G DV++R+ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P +S + A+ +P H N+ E +VLI G+GPIG++ + A+ GA +VI DV+DYRL + Sbjct: 13 LTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHEWM (L-threonine 3-dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L++++ +CG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVDIGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHESR (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-7) GN=tdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHESM (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-4) GN=tdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 66/185 (35.68%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L++++ +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+GGR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVIDMGIEVRGFDVGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHESA (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=tdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHEPC (L-threonine 3-dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLEL 203 The following BLAST results are available for this feature:
BLAST of FC868560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868560 ID=FC868560; Name=FC868560; organism=Citrus clementina; type=EST; length=697bpback to top |