FC868560

Overview
NameFC868560
Unique NameFC868560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDD 681
            L+I+ +E P L   +VLV+++A GVC +D+H        D+ +K   P++ GHE  G++ +V   VK++  GDRV + P +  +C +C+YC  G+  LCP     G   V G  A     PAD   K+PDN+   E A  +C  ++    A + +   P   V I G G +G + +  A+A G   +V VD+ D
Sbjct:   13 LEIKEVERPKLEEGEVLVKIEACGVCHTDLHAAH----GDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGI-PWLYSACGECEYCLTGQETLCPHQLN-GGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTT-YKALKVSGARPGEWVAIYGIGGLGHIALQYAKAMGL-NVVAVDISD 198          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_RALEU (Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 67/222 (30.18%), Postives = 101/222 (45.50%), Query Frame = 1
Query:   91 AAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV------------ALEPGISCWQCDYCKGGRYNLCPESKGLGS----PPVHGCLANQVVHP---ADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696
            AA  +    +++    +P +GP D LVR+    +CG+DVH LK     ++ V + + +GHE  G+IEK+GS V     G RV            A + G++     Y        C   K          + G  A  V+ P   A+L   +PD ++ E+  MC + +S G      ANI     V +   GPIGL    GAR  GA  I+ +D +D+RL +
Sbjct:    7 AAVFVEPGRIELADKPIPDIGPNDALVRITTTTICGTDVHILK----GEYPVAKGLTVGHEPVGIIEKLGSAVTGYREGQRVIAGAICPNFNSYAAQDGVASQDGSYLMASGQCGCHGYKATAGWRFGNMIDGTQAEYVLVPDAQANLT-PIPDGLTDEQVLMCPDIMSTGFKGAENANIRIGHTVAVFAQGPIGLCATAGARLCGATTIIAIDGNDHRLEI 223          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.511e-17
Identity = 62/214 (28.97%), Postives = 99/214 (46.26%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---------SKGLGSPPVHGCLANQVVHPADL----CFKLPDNVSLEEGAMCEPLSV---------GVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 693
            L I+ +E+      +V ++M A GVCG+D+  L T  L+ F    PM++GHE  G++E VG  V ++  GD+V L     C +C  C   + N+C E         S+G       G L +Q +           K      ++EGA  E + +         G  A   A + P +   + G G +GL  ++G +A GA RI+ VD++  R +
Sbjct:   22 LAIEEIEVAPPKAKEVRIKMVATGVCGTDIKHLDTQELSKFC---PMIMGHEGVGIVESVGEGVSSVRTGDKVILLCIPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGA-AINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFA 231          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 64/198 (32.32%), Postives = 100/198 (50.51%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLGARAFGAPRIVIVDVDDYRL 690
            LK++ + +P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V+ P     +KL    ++E   +         A R+A++ P   ++++G+ G +G + +  A+A     I+ VDV +  L
Sbjct:   13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEAL 209          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_SULSR (NAD-dependent alcohol dehydrogenase OS=Sulfolobus sp. (strain RC3) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLGARAFGAPRIVIVDV 675
            L ++ +++P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE++G EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V++P     +KL    ++E   +         A R+A++ P   ++++G+ G +G + +  A+A G   I+ VDV
Sbjct:   13 LVLKDIDIPKPKGAQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEMGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVLNPHYKYMYKLRRLNAVEASPLTCSGITTYRAVRKASLDPTKTLVVVGAGGGLGTMAVQIAKAVGGATIIGVDV 204          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_SULSO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus solfataricus GN=adh PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 64/193 (33.16%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLGARAFGAPRIVIVDV 675
            L +Q + +P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V+ P     +KL    ++E   +         A R+A++ P   +L++G+ G +G + +  A+A     I+ VDV
Sbjct:   13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV 204          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 693
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 693
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 693
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 693
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
The following BLAST results are available for this feature:
BLAST of FC868560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
ADH2_BACST9.239e-1833.51Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH_RALEU1.207e-1730.18Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh... [more]
ADH6_RAT3.511e-1728.97Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH_SULTO1.742e-1632.32NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_SULSR1.742e-1632.12NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_SULSO2.972e-1633.16NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_STAAW2.972e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS2.972e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAR2.972e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN2.972e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionC31001H08EF AbioticL1 Citrus clementina cDNA clone C31001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868560 ID=FC868560; Name=FC868560; organism=Citrus clementina; type=EST; length=697bp
GGCACTTGTGTTTTTGAAGAGTGCAAAGCAAATATGGGCAAGGGAGGGAT
GTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGC
TTATGGGTGTCAACACCCTCAAGATTCAGCCTTTGGAGCTTCCTTCTCTG
GGACCTTATGATGTTTTAGTCAGGATGAAAGCCGTTGGTGTTTGTGGAAG
TGATGTGCATTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAG
AGCCTATGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGA
AGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGG
GATCAGCTGCTGGCAATGTGATTACTGCAAAGGAGGTCGATACAATTTGT
GTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGTTCATGGTTGTCTGGCT
AATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCCGACAATGT
CAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATG
CCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGA
TCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGC
TCCTAGAATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTG
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