FC868560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 60/195 (30.77%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 160 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 +VL+++ GVC +D TL D P+V+GHE AGV+ +VG V ++ PGD V C +C++C+ G+ NLC + KGL G P H GC VV L P+ + ++ G+ A A + P +V + G G IGL + GAR A RI+ +D + Sbjct: 29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 60/195 (30.77%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 160 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 +VL+++ GVC +D TL D P+V+GHE AGV+ +VG V ++ PGD V C +C++C+ G+ NLC + KGL G P H GC VV L P+ + ++ G+ A A + P +V + G G IGL + GAR A RI+ +D + Sbjct: 29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 60/195 (30.77%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 160 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 +VL+++ GVC +D TL D P+V+GHE AGV+ +VG V ++ PGD V C +C++C+ G+ NLC + KGL G P H GC VV L P+ + ++ G+ A A + P +V + G G IGL + GAR A RI+ +D + Sbjct: 29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 60/195 (30.77%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 160 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 +VL+++ GVC +D TL D P+V+GHE AGV+ +VG V ++ PGD V C +C++C+ G+ NLC + KGL G P H GC VV L P+ + ++ G+ A A + P +V + G G IGL + GAR A RI+ +D + Sbjct: 29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 60/195 (30.77%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 160 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 +VL+++ GVC +D TL D P+V+GHE AGV+ +VG V ++ PGD V C +C++C+ G+ NLC + KGL G P H GC VV L P+ + ++ G+ A A + P +V + G G IGL + GAR A RI+ +D + Sbjct: 29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 52/206 (25.24%), Postives = 92/206 (44.66%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG--------------SPPVH-----GCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 I+ +E+ +V +++ A G+C +D H +K ++ F P+++GHE G++E +G V T+ PGD+V C +C+ C+ NLC S G PVH V K+ D E+ + S G A + + P + ++ G G +GL ++G ++ GA RI+ +D++ Sbjct: 24 IEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLN 225
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH_MYCTU (Probable alcohol dehydrogenase adh OS=Mycobacterium tuberculosis GN=adh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 62/200 (31.00%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKT---LVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPPVH-------GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETN----VLIMGSGPIGLVTMLGARAFGAPRIVI 666 L ++ LP +G D LVR++A G+CG+D H T LA P GHE G I +G + + GDRVA+E SC QC C+GG Y C + G PV G Q + P + ++ ++S E + PL G+ R PET V ++G G GL A+ GA +++ Sbjct: 18 LVVRQYRLPRIGDDDALVRVEACGLCGTD-HEQYTGELAGGFAFVP---GHETVGTIAAIGPRAEQRWGVSAGDRVAVEVFQSCRQCANCRGGEYRRCVRHGLADMYGFIPVDREPGLWGGYAEYQYLAPDSMVLRVAGDLSPEVATLFNPLGAGI---RWGVTIPETKPGDVVAVLGPGIRGLCAAAAAKGAGAGFVMV 210
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADHB_MYCTU (Alcohol dehydrogenase B OS=Mycobacterium tuberculosis GN=adhB PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 59/211 (27.96%), Postives = 96/211 (45.50%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK-TLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL--GSPPVHGCL----ANQVVHPADL--------------CFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYR 687 ++ +E+ +V ++M+A G+C SD H + + +A F P++ GHE AG++ +VG V PGD V L SC +C C+ G NLC GL G G Q V+P L K+ +V E + C + A R A++ P +V I+G G +G+ + GA + GA + V+ +++ Sbjct: 17 VEEIEIGDPRKDEVKIQMEAAGMCRSDHHLVTGDIPMAGF----PVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDLGAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVGLGGVGMAALQGAVSAGARYVFAVEPVEWK 223
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADHB_MYCBO (Alcohol dehydrogenase B OS=Mycobacterium bovis GN=adhB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 59/211 (27.96%), Postives = 96/211 (45.50%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK-TLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL--GSPPVHGCL----ANQVVHPADL--------------CFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYR 687 ++ +E+ +V ++M+A G+C SD H + + +A F P++ GHE AG++ +VG V PGD V L SC +C C+ G NLC GL G G Q V+P L K+ +V E + C + A R A++ P +V I+G G +G+ + GA + GA + V+ +++ Sbjct: 17 VEEIEIGDPRKDEVKIQMEAAGMCRSDHHLVTGDIPMAGF----PVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDLGAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVGLGGVGMAALQGAVSAGARYVFAVEPVEWK 223
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 59/222 (26.58%), Postives = 96/222 (43.24%), Query Frame = 1 Query: 94 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVD 678 AW G + L I+ +E+ +V +++ A VC +D++ + A F P+V+GHECAG++E VG V PGD+V C +C C NLC + + P + L VV A+L ++ D +LE + C S A A + P + + G G +GL ++G + GA RI+ +D++ Sbjct: 15 AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 230 The following BLAST results are available for this feature:
BLAST of FC868560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868560 ID=FC868560; Name=FC868560; organism=Citrus clementina; type=EST; length=697bpback to top |