FC868563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868563 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.296e-24 Identity = 69/187 (36.90%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 77 SAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD----PNYPCRGK--YYGRGPIQLTWNYITYG 619 SA NCG C G CCS++G+CG D+C GCQ Q C P + I++ + +++ + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+ E+ AS DYCD YPC Y+GRGPIQL+WN+ YG Sbjct: 22 SAQNCG----CAEGLCCSQYGYCGTGEDYCGTGCQ----QGPCTTASPPPSNNVNAD----ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNF-NYG 181
BLAST of FC868563 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.916e-24 Identity = 57/105 (54.29%), Postives = 67/105 (63.81%), Query Frame = 2 Query: 74 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGE-CDPDDGTAGDG--GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAF 370 GSA CG +CPGG CCS +GWCG T+D+C DGCQS C+ G+ CD G GDG G L II + F+ LL++RND RC A FYTYDAFI AAK F Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSFYGWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRCHAVGFYTYDAFISAAKEF 121
BLAST of FC868563 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 6.916e-24 Identity = 67/191 (35.08%), Postives = 96/191 (50.26%), Query Frame = 2 Query: 77 SAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSN-C----NQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR--GKYYGRGPIQLTWNYITYG 619 +A NCG C G CCS++G+CG T +C GCQS C + G G AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q++WN+ YG Sbjct: 26 AAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNF-NYG 196
BLAST of FC868563 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.483e-23 Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 251 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNYITYGA 622 + +IS +FE +L +R FYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT HETTGGWP AP G Y E+G+ S Y+GRGPIQ+++NY YGA Sbjct: 1 VSSVISSSLFEKMLLHRG--------FYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSD------------YFGRGPIQISYNY-NYGA 95
BLAST of FC868563 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.704e-22 Identity = 72/193 (37.31%), Postives = 87/193 (45.08%), Query Frame = 2 Query: 80 AGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDD----------GTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYCDPN----YPCRG--KYYGRGPIQLTWNY 607 A NCG C CCS FG+CG +C G NC C P GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C E G YCD + YPC KYYGRGP+QL+WNY Sbjct: 27 AQNCG----CAPNLCCSNFGFCGTGTPYCGVG---NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNY 196
BLAST of FC868563 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 6.474e-22 Identity = 62/167 (37.13%), Postives = 85/167 (50.90%), Query Frame = 2 Query: 122 CCSRFGWCGLTIDHCCDGCQSNCNQVVCGEC-DPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC--RGKYYGRGPIQLTWNY 607 CCS+ G+CG + D+C GCQ+ G C DP +G DG I + F D + + CP + FYT F+EA A+P FG + RKREIAA+FA HET C+ E +++YC + YPC +Y+GRGP+QL+WNY Sbjct: 11 CCSQHGYCGNSYDYCGPGCQA-------GPCWDPCEG---DGTLTVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHET-------------GHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNY 154 The following BLAST results are available for this feature:
BLAST of FC868563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868563 ID=FC868563; Name=FC868563; organism=Citrus clementina; type=EST; length=622bpback to top |