FC868564

Overview
NameFC868564
Unique NameFC868564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3361 contig Ccv1_Contig3361:42..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 53/218 (24.31%), Postives = 107/218 (49.08%), Query Frame = 2 
Query:   80 NQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAI-NDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVT-GNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVI-----ETDPPEYCVVAPDTEIFCEGEPVRSGD-ENRLDEVGYDDVGG 709
            N+         + +F    L+  K P   +V+    N DN  + +  + M++L    G T+L+KGKK+++ + IA  D + ++  + ++  ++ NLR+   D++ +H   + K  + V + P  DTI  ++   L  A + PY   +Y+P+R      +      +EFKV+     E++  E+  +   +++    E ++  D E   D++ Y+D+GG
Sbjct:  314 NEKTQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKKHYVVISFAMKKNLRLMHNDIIKIHPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGG 531
The following BLAST results are available for this feature:
BLAST of FC868564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CDAT_PLAF75.794e-1524.31Putative cell division cycle ATPase OS=Plasmodium ... [more]

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Properties
Property NameValue
Genbank descriptionC31001H12EF AbioticL1 Citrus clementina cDNA clone C31001H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868564 ID=FC868564; Name=FC868564; organism=Citrus clementina; type=EST; length=710bp
ATCATACACAAAATTCTGTTCTCTCAATTCCTCTAATCACTTTCGTTATC
TCATTCTCTTCAATCAACTAATTATGTCTAATCAAGCTGAATCCTCTGAT
GCTAAGGGGACGAAGAGGGACTTTAGTACGGCCATTTTGGAGCGAAAGAA
GGCACCGAATCGTCTCGTTGTTGATGAAGCTATTAACGATGATAACTCTG
TCGTTGTTCTTCATCCCGATACCATGGAGAAGCTCCAATTCTTCCGCGGT
GACACGATCCTCATCAAGGGAAAGAAAAGGAAAGATACCGTTTGTATTGC
CCTTGCCGACGATACATGTGAGGAACCGAAGATAAGAATGAATAAGGTCG
TGAGGTCGAACTTGAGGGTTAGACTCGGAGATGTTGTTTCTGTGCACCAG
TGCGCTGATGTCAAATACGGAAAGCGTGTGCACATATTACCTGTGGATGA
CACAATTGAAGGGGTTACTGGAAATCTCTTTGATGCATACTTGAAACCTT
ATTTCACGGAAGCTTATCGACCAGTGAGGAAGGGTGATCTATTCCTTGTT
AGAGGTGGAATGAGAAGTGTAGAGTTCAAGGTTATTGAGACTGACCCTCC
TGAATACTGTGTGGTTGCCCCTGATACTGAGATCTTCTGTGAGGGAGAGC
CAGTGAGAAGCGGAGATGAGAATCGATTAGATGAGGTTGGCTATGATGAT
GTTGGTGGGG
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