FC868581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PROM1 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL1A) GN=gcvP PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.605e-32 Identity = 70/115 (60.87%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP H ++ GG A + ++AAP+GSA ILPIS+ YI MMGS GL +AS IAIL+ANY+AKRL+ +YP+LF+ NG VAHE I+DLR LK+ GIE EDVAKRLMDYGFH Sbjct: 738 LPGHSIIKCGGEKA------ISAVSAAPFGSAGILPISWMYIRMMGSDGLRKASSIAILSANYLAKRLDPYYPVLFKDPNGLVAHECILDLRPLKSQLGIEVEDVAKRLMDYGFH 846
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_TERTT (Glycine dehydrogenase [decarboxylating] OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvP PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.293e-31 Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 L +HP+ G A GT++AAPWGSA ILPIS+ YI MMG+KG+ AS+ AILNANY+AKRL+ H+PIL+ G +G VAHE ++DLR LK +G+ ED+AKRLMD+GFH Sbjct: 735 LAAHPLQEIPGTVAAN-----GTVSAAPWGSASILPISWMYIRMMGAKGMKMASEYAILNANYIAKRLKNHFPILYSGKHGFVAHECLLDLRPLKEASGVSEEDIAKRLMDFGFH 844
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.293e-31 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP H +V+ G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++ +ILNANY+AKRLEK YP+L++G NG VAHE I+DLR K +AGIE EDVAKRL+DYGFH Sbjct: 739 LPGHVLVNNA------TGNEHGAVSAAPWGSASIVLISWVYIALMGSEGLTNATRNSILNANYIAKRLEKVYPVLYKGKNGFVAHECILDLRPFKKSAGIEVEDVAKRLIDYGFH 847
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_SACD2 (Glycine dehydrogenase [decarboxylating] OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvP PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.689e-31 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 L HPV P P GTI+AAPWGSA IL IS+ YI MMG++G+ A++ AILNANY+A RL+ HYPIL++G NG +AHE ++DLR LK ++GI ED+AKRLMD+GFH Sbjct: 736 LAGHPVQ-----PVPNTLVENGTISAAPWGSASILTISWMYIRMMGAEGMKRATEFAILNANYIAHRLQDHYPILYKGKNGYIAHECLLDLRPLKESSGITEEDIAKRLMDFGFH 845
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.689e-31 Identity = 64/94 (68.09%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++ +ILNANY+AKRLEK YP+L++G NG VAHE I+DLR K +AGIE EDVAKRL+DYGFH Sbjct: 754 GAVSAAPWGSASIVLISWVYIALMGSEGLTNATRNSILNANYIAKRLEKVYPVLYKGKNGFVAHECILDLRPFKKSAGIEVEDVAKRLIDYGFH 847
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PHOPR (Glycine dehydrogenase [decarboxylating] OS=Photobacterium profundum GN=gcvP PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.913e-31 Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 ++AA GSA ILPISY YIAMMG +GLTEA+K+AILNANY+ +RL HYP+L+RG G +AHE I+D+R LK +GI EDVAKRLMDYGFH Sbjct: 749 VSAAELGSASILPISYAYIAMMGEEGLTEATKLAILNANYVMERLRPHYPVLYRGTEGRIAHECIIDIRPLKEASGISEEDVAKRLMDYGFH 840
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBL (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvP PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.913e-31 Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++I+ILNANY+AKRLEK YP+L++G NG VAHE I+D+R K +A IE EDVAKRL+DYGFH Sbjct: 754 GAVSAAPWGSASIVLISWIYIALMGSEGLTNATRISILNANYIAKRLEKAYPVLYKGKNGFVAHECILDVRPFKKSAEIEVEDVAKRLIDYGFH 847
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBJ (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvP PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.913e-31 Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++I+ILNANY+AKRLEK YP+L++G NG VAHE I+D+R K +A IE EDVAKRL+DYGFH Sbjct: 754 GAVSAAPWGSASIVLISWIYIALMGSEGLTNATRISILNANYIAKRLEKAYPVLYKGKNGFVAHECILDVRPFKKSAEIEVEDVAKRLIDYGFH 847
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.913e-31 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRLMDYGFH Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKETSGISVDDVAKRLMDYGFH 858
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_BURCJ (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvP PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.913e-31 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRLMDYGFH Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKETSGISVDDVAKRLMDYGFH 858 The following BLAST results are available for this feature:
BLAST of FC868581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868581 ID=FC868581; Name=FC868581; organism=Citrus clementina; type=EST; length=345bpback to top |