FC868581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_VIBPA (Glycine dehydrogenase [decarboxylating] OS=Vibrio parahaemolyticus GN=gcvP PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.095e-30 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 ++AA +GSA ILPIS+ YIAMMG GL+ A+K+AILNANY+ +RL HYP+L+RG NG VAHE I+D+R LK GI ED+AKRLMDYGFH Sbjct: 745 VSAADFGSASILPISWAYIAMMGEAGLSNATKVAILNANYVMERLRPHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFH 836
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_VIBHB (Glycine dehydrogenase [decarboxylating] OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvP PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.095e-30 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 ++AA GSA ILPIS+ YIAMMG GLT+A+K+AILNANY+ ++L HYP+L+RG NG VAHE I+D+R LK GI ED+AKRLMDYGFH Sbjct: 745 VSAADMGSASILPISWAYIAMMGEAGLTDATKVAILNANYVMEQLRPHYPVLYRGSNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFH 836
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_RHOP5 (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris (strain BisA53) GN=gcvP PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.095e-30 Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEK-SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP G P+ S GT+AAAPWGSA +L ISY YI +MG GL A+++AILNANY+A +L+ H+P+L++ G VAHE IVD R LKN++G+ +D+AKRL+DYGFH Sbjct: 728 LPGHPCCDDTG---PDGFSHGGGTVAAAPWGSASVLTISYVYILLMGGDGLKRATEVAILNANYVAAKLDPHFPVLYKNERGRVAHECIVDPRALKNSSGVTVDDIAKRLIDYGFH 840
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.095e-30 Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP H VV G + + ++A PWGS+ ILPI+Y Y+ +MG +GL +A+++AILNANYMA RL+ HY IL+ G +G VAHEFI+DLR K +AGIE EDVAKRL D FH Sbjct: 768 LPGHSVVKGVG-----GERAMSAVSAGPWGSSSILPITYVYLKLMGGQGLKKATQVAILNANYMASRLKDHYKILYTGSHGLVAHEFIIDLRMFKESAGIEAEDVAKRLQDMNFH 877
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PSESM (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. tomato GN=gcvP PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.266e-30 Identity = 58/94 (61.70%), Postives = 79/94 (84.04%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G + AAP+GSA ILPI++ YI MMG +GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR +K+++GI +DVAKRL+D+GFH Sbjct: 743 GAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGTNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFH 836
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PSE14 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gcvP PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.266e-30 Identity = 58/94 (61.70%), Postives = 79/94 (84.04%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G + AAP+GSA ILPI++ YI MMG +GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR +K+++GI +DVAKRL+D+GFH Sbjct: 743 GAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGTNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFH 836
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEF5 (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.266e-30 Identity = 59/94 (62.77%), Postives = 79/94 (84.04%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G + AAP+GSA ILPI++ YI+MMG GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR LK+++GI +DVAKRL+D+GFH Sbjct: 740 GAVCAAPFGSASILPITWMYISMMGGAGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFH 833
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_SYNPX (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain WH8102) GN=gcvP PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.210e-29 Identity = 62/115 (53.91%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP+ ++ Q +G ++AA GSA ILPIS+ Y+ MMG++ L +A+ +A+L+ANY+A RL+ HYP+LFRG G VAHE I+DLR LK AGI+ +D+AKRLMDYGFH Sbjct: 730 LPGHPMQAS-------PDQAIGPVSAAALGSASILPISWMYLRMMGAEALRQATAVALLSANYLALRLDPHYPVLFRGATGRVAHECILDLRPLKRDAGIDVDDIAKRLMDYGFH 837
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_RALEJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia eutropha (strain JMP134) GN=gcvP PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.210e-29 Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +G ++AAP+GSA ILPIS+ YIAMMGS GLT A++ AIL ANY+AKRL HYP+L+ G +G VAHE I+DLR L+ GI EDVAKRLMDYGFH Sbjct: 763 IGGVSAAPFGSASILPISWMYIAMMGSAGLTAATENAILTANYVAKRLSPHYPVLYTGQHGLVAHECILDLRPLQKETGISNEDVAKRLMDYGFH 857
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_BRASO (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain ORS278) GN=gcvP PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.210e-29 Identity = 62/115 (53.91%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP +T G + + P+G ++AAP+GSA IL ISY Y+ +MG +GLT A++IAILNANY+A RL+ H+P+L+R G +AHE I+D R LK T+G+ +D+AKRL+DYGFH Sbjct: 728 LPGHP--ATDG----KTAHPVGPVSAAPYGSASILTISYIYMLLMGGEGLTRATEIAILNANYVAARLDAHFPVLYRNERGRIAHECIIDPRLLKQTSGVTVDDIAKRLIDYGFH 836 The following BLAST results are available for this feature:
BLAST of FC868581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868581 ID=FC868581; Name=FC868581; organism=Citrus clementina; type=EST; length=345bpback to top |