FC868581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU2 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gcvP PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 58/94 (61.70%), Postives = 79/94 (84.04%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G + AAP+GSA ILPI++ YI MMG +GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR +K+++GI +DVAKRL+D+GFH Sbjct: 743 GAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFH 836
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 1 Query: 19 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +S+G AP +G ++ AP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AK+L HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRL DYGFH Sbjct: 756 ISSGYERAPNG---IGAVSGAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYVAKKLAPHYPVLYSGPGGLVAHECILDLRPIKETSGITVDDVAKRLADYGFH 861
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 1 Query: 19 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +S+G AP +G ++ AP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AK+L HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRL DYGFH Sbjct: 756 ISSGYERAPNG---IGAVSGAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYVAKKLAPHYPVLYSGPGGLVAHECILDLRPIKETSGITVDDVAKRLADYGFH 861
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_BRASB (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gcvP PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP P+G ++AAP+GSA IL ISY Y+ +MG +GLT A++IAILNANY+A RL+ H+P+L+R G VAHE I+D R LK T G+ +D+AKRL+DYGFH Sbjct: 728 LPGHPATDAA------TPSPVGPVSAAPYGSASILTISYIYMLLMGGEGLTRATEIAILNANYVAARLDPHFPVLYRNERGRVAHECIIDPRPLKQTCGVTVDDIAKRLIDYGFH 836
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPF (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 59/94 (62.77%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 G + AAP+GSA ILPI++ YI MMG GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR LK+++GI +DVAKRL+D+GFH Sbjct: 741 GAVCAAPFGSASILPITWMYIRMMGGAGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFH 834
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_NITWN (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gcvP PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.064e-29 Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP + A +G ++AAP+GSA IL ISY YI MMGS+GL A+++AILNANY+A+RL+ H+P+L+R V G VAHE I+D R LK G+ +D+AKRL+DYGFH Sbjct: 725 LPGHPAIDDATPSA------VGPVSAAPFGSASILTISYIYILMMGSEGLKRATEVAILNANYIAQRLDPHFPVLYRNVKGRVAHECIIDPRALKAKTGVTVDDIAKRLIDYGFH 833
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP2_COLP3 (Glycine dehydrogenase [decarboxylating] 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.064e-29 Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP H V +T +G ++A GSA ILPIS+ YIA+MG++GL A+++AILNANY+ ++L HYPILFRG G VAHE I+DLR LK ++GI EDVAKRLMD+GFH Sbjct: 732 LPGHSVTNT-----------VGAVSATALGSASILPISWAYIALMGAEGLKSATELAILNANYIMEKLSPHYPILFRGKQGRVAHECIIDLRPLKESSGISEEDVAKRLMDFGFH 835
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_RALSO (Glycine dehydrogenase [decarboxylating] OS=Ralstonia solanacearum GN=gcvP PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.696e-29 Identity = 59/100 (59.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 46 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 + SQ +G ++AAP+GSA ILPIS+ YIAMMG+ GLT A++ AIL+ANY+A+RL +YP+L+ G +G VAHE I+D+R L+ +GI ED+AKRLMD+GFH Sbjct: 764 DASQNIGAVSAAPFGSASILPISWMYIAMMGAAGLTAATEAAILSANYVARRLSPYYPVLYTGAHGLVAHECILDIRPLQKESGISNEDIAKRLMDFGFH 863
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_IDILO (Glycine dehydrogenase [decarboxylating] OS=Idiomarina loihiensis GN=gcvP PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.696e-29 Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP+H +V+ G A G ++AA +GSA IL IS+ YIAMMG +GL EAS+ AILNANY+A++L KH+ IL+RG N VAHE I+DLR +K+ AGI DVAKRL DYGFH Sbjct: 736 LPNHSIVNIDGPKAGN-----GAVSAAQFGSASILTISWMYIAMMGGRGLREASETAILNANYLAEKLSKHFKILYRGRNNRVAHECIIDLRPMKDAAGIAEIDVAKRLQDYGFH 845
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_RHOPA (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris GN=gcvP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.521e-29 Identity = 63/115 (54.78%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP G P GT++AAPWGSA IL ISY YI MMG+ GL A++IAILNANY+A +L H+P+L+R G VAHE I+D R LK + G+ +D+AKRL+DYGFH Sbjct: 752 LPGHPAE---GEPLNGGLHGGGTVSAAPWGSASILTISYIYILMMGAAGLKRATEIAILNANYIAAKLHPHFPVLYRNPRGRVAHECIIDPRALKTSTGVTVDDIAKRLIDYGFH 863 The following BLAST results are available for this feature:
BLAST of FC868581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868581 ID=FC868581; Name=FC868581; organism=Citrus clementina; type=EST; length=345bpback to top |