FC868581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PECCP (Glycine dehydrogenase [decarboxylating] OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.521e-29 Identity = 62/115 (53.91%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +P H VV G+ + G ++AAP+GSA ILPIS+ YI MMG++GL +AS++AILNANY+A RL++ YP+L+ G +G VAHE I+D+R LK + GI D+AKRL+DYGFH Sbjct: 734 VPGHQVVKIDGVLTEQ-----GAVSAAPFGSASILPISWMYIRMMGAEGLKQASQMAILNANYIATRLQQAYPVLYTGRDGRVAHECILDIRPLKESTGISEMDIAKRLIDYGFH 843
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_ERWCT (Glycine dehydrogenase [decarboxylating] OS=Erwinia carotovora subsp. atroseptica GN=gcvP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.521e-29 Identity = 62/115 (53.91%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +P H VV G+ + G ++AAP+GSA ILPIS+ YI MMG++GL +AS++AILNANY+A RL++ YP+L+ G +G VAHE I+D+R LK + GI D+AKRL+DYGFH Sbjct: 734 VPGHQVVKIDGVLTEQ-----GAVSAAPFGSASILPISWMYIRMMGAEGLKQASQMAILNANYIATRLQQAYPVLYTGRDGRVAHECILDIRPLKESTGISEMDIAKRLIDYGFH 843
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_CHRVO (Glycine dehydrogenase [decarboxylating] OS=Chromobacterium violaceum GN=gcvP PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.599e-29 Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 37 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 P P + ++AAP+GSA ILPISY YIAMMG++G+ +A++ A+L+ANY+A RL +H+P+L+ G NG VAHE I+DLR LK +G+ DVAKRLMDYGFH Sbjct: 732 PVPGAVEGQTAVSAAPFGSASILPISYMYIAMMGAEGMKQATENALLSANYLATRLSEHFPVLYTGANGRVAHECIIDLRPLKAASGVTEVDVAKRLMDYGFH 834
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_SCHPO (Putative glycine dehydrogenase [decarboxylating], mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13G6.06c PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29 Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LPSHPVVS GG + +++++P+GSA ILPIS+ Y+ MMG GL +ASK A+LNANYMAKRL HY +++ N AHEFI+D R K TAG++ D+AKRL DY FH Sbjct: 795 LPSHPVVSCGG------KNGITSVSSSPFGSAGILPISWAYMRMMGLAGLRDASKAALLNANYMAKRLSSHYKLVYTNKNNLCAHEFILDAREFKATAGVDATDIAKRLQDYSFH 903
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_RALME (Glycine dehydrogenase [decarboxylating] OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvP PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +G ++AAP+GSA ILPIS+ YIAMMGS GLT A++ AIL ANY+A+RL H+P+L+ G +G VAHE I+DLR L+ GI EDVAKRLMDYGFH Sbjct: 761 IGGVSAAPFGSASILPISWMYIAMMGSAGLTAATENAILTANYVARRLSPHFPVLYTGQHGLVAHECILDLRPLQKATGISNEDVAKRLMDYGFH 855
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_EDWI9 (Glycine dehydrogenase [decarboxylating] OS=Edwardsiella ictaluri (strain 93-146) GN=gcvP PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29 Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +P H VV G+ + G ++AAP+GSA ILPIS+ YI MMG++GL AS +AILNANY+A+RL YP+L+RG G VAHE I+DLR LK +GI D+AKRL+DYGFH Sbjct: 735 VPGHRVVQLAGLTTRQ-----GAVSAAPFGSASILPISWMYIRMMGAEGLRRASTVAILNANYIARRLGAVYPVLYRGKEGYVAHECILDLRPLKARSGISEMDIAKRLIDYGFH 844
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_DEIRA (Glycine dehydrogenase [decarboxylating] OS=Deinococcus radiodurans GN=gcvP PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29 Identity = 60/115 (52.17%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP+H V AP G ++AAP+GSA ILPISY YI ++G+ GL +++++A+LNANY+AKRL +P+L+ G G VAHE I+D+R LK +G+ ED+AKRLMDYGFH Sbjct: 723 LPNHAV-------APTSDSHTGAVSAAPYGSASILPISYLYIKLLGAAGLRQSTQVALLNANYIAKRLSGAFPVLYSGKGGRVAHECILDIRPLKQESGVSEEDIAKRLMDYGFH 830
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEF5 (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29 Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 7 SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 +HPVV G P PE G ++AAPWGSA ILPIS+ YIA+MG + L +AS++AIL ANY+A++L +P+L+ G NG VAHE I+DLR LK GI EDVAKRLMDYGFH Sbjct: 732 NHPVVPIDG-PLPEN----GAVSAAPWGSASILPISWMYIALMGPQ-LADASEVAILAANYLAEQLSGAFPVLYSGRNGRVAHECILDLRPLKAQTGISEEDVAKRLMDYGFH 838
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_SYNS9 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain CC9902) GN=gcvP PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.844e-29 Identity = 61/115 (53.04%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 LP HP + + + +G ++AA GSA ILPIS+ Y+ MMG+ L +AS +A+L+ANY+A RL+ H+P+LFRG G VAHE I+DLR LK AGI+ +D+AKRLMDYGFH Sbjct: 731 LPGHPFEN-------QTASAIGPVSAAALGSASILPISWMYLRMMGADALRQASAVALLSANYLAHRLDDHFPVLFRGATGRVAHECILDLRPLKRDAGIDVDDIAKRLMDYGFH 838
BLAST of FC868581 vs. ExPASy Swiss-Prot
Match: GCSP_PSYIN (Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii (strain 37) GN=gcvP PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.844e-29 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 345 ++AA GSA ILPISY YIAMMG +GLT A++IAILNANY+ +RL HYPIL++G G VAHE I+D+R L+ +GI ED+AKRLMDYGFH Sbjct: 756 VSAAELGSASILPISYAYIAMMGEQGLTSATQIAILNANYIMERLRPHYPILYQGKEGRVAHECIIDIRPLEAASGISNEDIAKRLMDYGFH 847 The following BLAST results are available for this feature:
BLAST of FC868581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868581 ID=FC868581; Name=FC868581; organism=Citrus clementina; type=EST; length=345bpback to top |