FC868588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_XENLA (Protein NDRG2 OS=Xenopus laevis GN=ndrg2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 55/179 (30.73%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS-RXVRGNAQV 658 I+T +G ++VTI G +PA+VT+ D+ +++ CF LF + C ++ NF + HI+ PG E GA S+D LA+ I VL + +++ +GV AGAYI + + + + V GL+L++ A W +W K+ G+ + + +L FS + GN+ V Sbjct: 39 IETPYGVVTVTIQGTPKPKRPAIVTFHDVGMDHKMCFDTLFKYEDMCEIV-KNFVVCHIDAPGQEDGATIYPPGYQYPSLDQLAETIPCVLQYLNFPSIIGIGVGAGAYIFAKYTLSHANTVEGLVLINIDPNAKGWMDWAAQKLT-------GLTQSISDKMLGHLFSAEEISGNSDV 209
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG4_MOUSE (Protein NDRG4 OS=Mus musculus GN=Ndrg4 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17 Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSRXVRGNAQVPESDIVQACRR 691 I+T +G L V I G ++PA++TY D+ LN+ CF FF E + +F + H++ PG + GA+ S++ LA + V+ HFG V+ +GV AGAY+L FA+ + V GL+L++ W +W K+ G+ + + +L FS+ V +++VQ+ R+ Sbjct: 11 IETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFN-TFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKLS-------GLTSTLPDTVLSHLFSQ----EELVNNTELVQSYRQ 187
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG_DICDI (NDRG-like protein OS=Dictyostelium discoideum GN=DDB_G0270324 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16 Identity = 55/195 (28.21%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 59 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSL----SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 631 + +S + V + + P+ + ++T HG L + + P +++Y DL LN+ +CF F P +L + I HI PGHEF A I + S+ ++A+ I VL++F + + +G AG ILT +++ Y V+GL+LV + K+ SW +W+ + V L V++ L+ Y++ Sbjct: 11 VTESPINVVVHNYDNNDPTETRHEVQTKHGKLVCFQKIGSNQSPNMPTIISYHDLGLNHTTCFSPFFNHPNMNHILPY-LNIIHIEAPGHEFNAETIPSSQ-YPSITEMAEDIQYVLDYFKVKVFIGLGAGAGGCILTQYSIFYPRSVVGLVLVGSVIKSFSWLDWVKSWVELTTLPSLKNPTGVRKYLIDHYYA 203 The following BLAST results are available for this feature:
BLAST of FC868588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868588 ID=FC868588; Name=FC868588; organism=Citrus clementina; type=EST; length=722bpback to top |