FC868602

Overview
NameFC868602
Unique NameFC868602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_PYRKO (Inorganic pyrophosphatase OS=Pyrococcus kodakaraensis GN=ppa PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.539e-21
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  208 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLP 450
            +P+H+LE GP  P +   ++EI KGS+ KYELDKKTGL+K+DR+LYS   YP +YG IP+T  +D D  D++++M EPV P
Sbjct:    2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPVYP 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_PYRHO (Inorganic pyrophosphatase OS=Pyrococcus horikoshii GN=ppa PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.539e-21
Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 1
Query:  208 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLP 450
            +P+HDLE GP  P +   ++EI KGS+ KYELDK+TGL+K+DR+LY+   YP +YG IPRT  ED D  D++++M EP  P
Sbjct:    2 NPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVDYGIIPRTWYEDGDPFDIMVIMREPTYP 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans GN=ppa PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.928e-21
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  208 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLP 450
            HPWHD+  G   P I N V+EI +GS+ KYE+DK+ G++K+DR+LYSS  YP NYGFIP++ C D D +D+L+L    + P
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEP 83          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ppa PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.928e-21
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  208 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLP 450
            HPWHD+  G   P I N V+EI +GS+ KYE+DK+ G++K+DR+LYSS  YP NYGFIP++ C D D +D+L+L    + P
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEP 83          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_AERPE (Inorganic pyrophosphatase OS=Aeropyrum pernix GN=ppa PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 7.742e-21
Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 1
Query:  223 LEIGPG--APTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            L+IGPG  AP + NVV+EI   S VKYE DK+  ++KVDR LY+S+VYP NYGFIP TL ED D +DVL++  EPV PG
Sbjct:    5 LKIGPGDEAPDVVNVVIEIPMNSSVKYEFDKEACIVKVDRFLYTSMVYPFNYGFIPGTLEEDGDPVDVLVISREPVAPG 83          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_METKA (Inorganic pyrophosphatase OS=Methanopyrus kandleri GN=ppa PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.018e-20
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  214 WHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            W DLE GP  P +   V+EI +GS+ KYE D++ G  K+DR+LYS   YP +YGFIPRTL +D D +D+L++M +P  PG
Sbjct:    5 WKDLEPGPNPPDVVYAVIEIPRGSRNKYEYDEERGFFKLDRVLYSPFHYPLDYGFIPRTLYDDGDPLDILVIMQDPTFPG 84          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_METTH (Inorganic pyrophosphatase OS=Methanobacterium thermoautotrophicum GN=ppa PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.253e-19
Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  214 WHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            W D+E GP  P +   VVEI KGS+ KYE  K      +DR+LYS+V YP  YG IPRTL +D D MD+L+LM EP  PG
Sbjct:    4 WKDIEPGPSVPEVVYAVVEIPKGSRNKYEYHKDLQAFALDRVLYSAVFYPAEYGIIPRTLYDDGDPMDILVLMDEPTFPG 83          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_AQUPY (Inorganic pyrophosphatase OS=Aquifex pyrophilus GN=ppa PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.548e-19
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query:  214 WHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            + DL  G   P    VV+EI +GS +KYELDK TG+I VDR L++++ YP NYGFIP+TL +D D +DVL++  EPV PG
Sbjct:    3 YKDLPPGKNPPEDIYVVIEIPQGSGIKYELDKDTGVIFVDRFLFTAMYYPFNYGFIPQTLADDGDPVDVLVISREPVAPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_AQUAE (Inorganic pyrophosphatase OS=Aquifex aeolicus GN=ppa PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.236e-18
Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1
Query:  214 WHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            +  L  G   P    VV+EI +GS VKYELDK TG+I VDR L++++ YP NYGF+P+TL +D D +DVL++  EPV+PG
Sbjct:    3 YDQLPPGKNPPEDIYVVIEIPQGSAVKYELDKDTGVIFVDRFLFTAMYYPFNYGFVPQTLADDGDPVDVLVISREPVVPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_SULTO (Inorganic pyrophosphatase OS=Sulfolobus tokodaii GN=ppa PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.614e-18
Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 1
Query:  223 LEIGPG--APTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            +++ PG  AP   NV++EI  GS +KYE D++  ++KVDRILY+S+VYP NYGFIP TL ED D +DVL++ + P+LPG
Sbjct:    1 MKLSPGKKAPDEVNVLIEIPLGSNIKYEYDEEEEVVKVDRILYTSMVYPFNYGFIPGTLEEDGDPLDVLVISNYPLLPG 79          
The following BLAST results are available for this feature:
BLAST of FC868602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
IPYR_PYRKO4.539e-2153.09Inorganic pyrophosphatase OS=Pyrococcus kodakaraen... [more]
IPYR_PYRHO4.539e-2153.09Inorganic pyrophosphatase OS=Pyrococcus horikoshii... [more]
IPYR_LEPIN5.928e-2151.85Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_LEPIC5.928e-2151.85Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_AERPE7.742e-2160.76Inorganic pyrophosphatase OS=Aeropyrum pernix GN=p... [more]
IPYR_METKA5.018e-2051.25Inorganic pyrophosphatase OS=Methanopyrus kandleri... [more]
IPYR_METTH3.253e-1953.75Inorganic pyrophosphatase OS=Methanobacterium ther... [more]
IPYR_AQUPY5.548e-1953.75Inorganic pyrophosphatase OS=Aquifex pyrophilus GN... [more]
IPYR_AQUAE1.236e-1852.50Inorganic pyrophosphatase OS=Aquifex aeolicus GN=p... [more]
IPYR_SULTO1.614e-1854.43Inorganic pyrophosphatase OS=Sulfolobus tokodaii G... [more]

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Properties
Property NameValue
Genbank descriptionC31002E03EF AbioticL1 Citrus clementina cDNA clone C31002E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868602 ID=FC868602; Name=FC868602; organism=Citrus clementina; type=EST; length=453bp
GGTTCTGTGAAAGTGAAAGTTGACCAACCAGCAACCCTTCGATCTCTTGC
TAGTAGCTACATTTCCGTGTCTTCATCAACAATCAAAGAGATGAGTGAGG
AGGCGGCGCATGGAGATGGAAGTGAAGCTGTTGAAGCTCCACAGGGTTCA
GTTCCTCGGCTGAACGAGAGGATCCTCTCATCTATGTCGAGGAGATCAGT
TGCTGCACATCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCACCA
TCTTCAATGTTGTTGTTGAGATATCAAAGGGAAGTAAGGTCAAATATGAA
CTTGACAAGAAAACAGGATTGATTAAGGTTGATCGAATTCTTTATTCCTC
TGTGGTCTATCCTCATAACTATGGTTTCATCCCTCGCACATTATGTGAAG
ATAATGATNCCATGGATGTCTTGATTCTTATGCACGAGCCAGTCCTTCCC
GGA
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