FC868602

Overview
NameFC868602
Unique NameFC868602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_METMA (Inorganic pyrophosphatase OS=Methanosarcina mazei GN=ppa PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 1
Query:  259 VVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            V++EI +GS+ KYE DK+  +I+ DR+L+SS+VYP +YGF P TL  D D +D ++LM EP  PG
Sbjct:    9 VLIEIPQGSRNKYEYDKERKVIRFDRMLFSSIVYPCDYGFFPDTLALDGDPLDAMVLMWEPTFPG 73          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_MYCPE (Inorganic pyrophosphatase OS=Mycoplasma penetrans GN=ppa PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.115e-14
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  256 NVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            NV +EI K S VKYE D+KT  I VDRIL+ + VYPHNYGFI   L  D D +D L++  +  LPG
Sbjct:    4 NVTIEIPKKSNVKYEYDRKTNQISVDRILFGTEVYPHNYGFIKEALDWDGDELDALVIADQSFLPG 69          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_RICCN (Inorganic pyrophosphatase OS=Rickettsia conorii GN=ppa PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.374e-14
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  256 NVVVEISKGS-KVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            NV++EI   S  +KYE DK++G I VDR + +++ YP NYGFIP TL  D D +DVL++ H PV+PG
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAIFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVAHHPVVPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_RICBR (Inorganic pyrophosphatase OS=Rickettsia bellii (strain RML369-C) GN=ppa PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  256 NVVVEISKGS-KVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            NV++EI   S  +KYE DK++G + VDR + +++ YP NYGFIP TL  D D +DVL++ H PV+PG
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAVFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVSHHPVVPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_LEGPN (Inorganic pyrophosphatase OS=Legionella pneumophila GN=ppa PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  220 DLEIGPGAPTIFNVVVEISK-GSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            ++  G   P   NV++EI   G  VKYE+DKKTG + VDR + +++ YP NYG+IP TL ED D +DVL++   P++ G
Sbjct:    5 EIPSGRDVPNEVNVIIEIPMHGEPVKYEVDKKTGALFVDRFMTTAMFYPTNYGYIPNTLSEDGDPVDVLVITPVPLISG 83          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_RICTY (Inorganic pyrophosphatase OS=Rickettsia typhi GN=ppa PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.166e-14
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  256 NVVVEISKGS-KVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            NV++EI   S  +KYE DK++G I VDR + +++ YP NYGFIP TL  D D +DVL++ H PV+PG
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAIFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_RICPR (Inorganic pyrophosphatase OS=Rickettsia prowazekii GN=ppa PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.564e-13
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  256 NVVVEISKGS-KVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            NV++EI   S  +KYE DK++G + VDR + +++ YP NYGFIP TL  D D +DVL++ H PV+PG
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_RICFE (Inorganic pyrophosphatase OS=Rickettsia felis GN=ppa PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.042e-13
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  256 NVVVEISKG-SKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            NV++EI      +KYE DK++G + VDR + +++ YP NYGFIP TL  D D +DVL++ H PV+PG
Sbjct:   16 NVIIEIPMNIGPIKYEFDKESGAVFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVAHHPVVPG 82          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAO (Inorganic pyrophosphatase OS=Pseudanabaena sp. (strain PCC 6903) GN=ppa PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.042e-13
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1
Query:  250 IFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRT--LCEDNDXMDVLILMHEPVLPG 453
            I NV++EI  GSK KYE DK      +DR+LYSSV YP++YGF+P T  L +D D +D +++M  P  PG
Sbjct:   14 ILNVLIEIPAGSKNKYEFDKDLNAFALDRVLYSSVQYPYDYGFVPITNNLADDGDPLDGMVIMVPPTFPG 83          
BLAST of FC868602 vs. ExPASy Swiss-Prot
Match: IPYR_MYCPN (Inorganic pyrophosphatase OS=Mycoplasma pneumoniae GN=ppa PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.042e-13
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  250 IFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDXMDVLILMHEPVLPG 453
            + +V VEI K SK+KYE D+KT  I+VDRIL+ S  YP NYGFI  TL  D D +D  I   +  LPG
Sbjct:    5 LIDVTVEIPKSSKIKYEYDRKTSQIRVDRILFGSESYPQNYGFIANTLDWDGDELDCFIFADQAFLPG 72          
The following BLAST results are available for this feature:
BLAST of FC868602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
IPYR_METMA3.150e-1452.31Inorganic pyrophosphatase OS=Methanosarcina mazei ... [more]
IPYR_MYCPE4.115e-1454.55Inorganic pyrophosphatase OS=Mycoplasma penetrans ... [more]
IPYR_RICCN5.374e-1452.24Inorganic pyrophosphatase OS=Rickettsia conorii GN... [more]
IPYR_RICBR7.018e-1450.75Inorganic pyrophosphatase OS=Rickettsia bellii (st... [more]
IPYR_LEGPN7.018e-1445.57Inorganic pyrophosphatase OS=Legionella pneumophil... [more]
IPYR_RICTY9.166e-1452.24Inorganic pyrophosphatase OS=Rickettsia typhi GN=p... [more]
IPYR_RICPR1.564e-1350.75Inorganic pyrophosphatase OS=Rickettsia prowazekii... [more]
IPYR_RICFE2.042e-1349.25Inorganic pyrophosphatase OS=Rickettsia felis GN=p... [more]
IPYR_PSEAO2.042e-1350.00Inorganic pyrophosphatase OS=Pseudanabaena sp. (st... [more]
IPYR_MYCPN2.042e-1352.94Inorganic pyrophosphatase OS=Mycoplasma pneumoniae... [more]

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Properties
Property NameValue
Genbank descriptionC31002E03EF AbioticL1 Citrus clementina cDNA clone C31002E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868602 ID=FC868602; Name=FC868602; organism=Citrus clementina; type=EST; length=453bp
GGTTCTGTGAAAGTGAAAGTTGACCAACCAGCAACCCTTCGATCTCTTGC
TAGTAGCTACATTTCCGTGTCTTCATCAACAATCAAAGAGATGAGTGAGG
AGGCGGCGCATGGAGATGGAAGTGAAGCTGTTGAAGCTCCACAGGGTTCA
GTTCCTCGGCTGAACGAGAGGATCCTCTCATCTATGTCGAGGAGATCAGT
TGCTGCACATCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCACCA
TCTTCAATGTTGTTGTTGAGATATCAAAGGGAAGTAAGGTCAAATATGAA
CTTGACAAGAAAACAGGATTGATTAAGGTTGATCGAATTCTTTATTCCTC
TGTGGTCTATCCTCATAACTATGGTTTCATCCCTCGCACATTATGTGAAG
ATAATGATNCCATGGATGTCTTGATTCTTATGCACGAGCCAGTCCTTCCC
GGA
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