FC868610

Overview
NameFC868610
Unique NameFC868610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STAAM (Cell division protein ftsZ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ftsZ PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47
Identity = 101/199 (50.75%), Postives = 128/199 (64.32%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            +NAVNRMI+  M  VEF  +NTD QA+ +S    E+++QIG++LTRGLGAG NPEIG              + GADMVF                     K MG LTVG+VT PFSFEGR+R  QA  G+ +++  VDTLIVIPND+LL  V +STP+ EAF  AD++LRQGV+GISD+I + G VN+DFADV+ I  N
Sbjct:   24 NNAVNRMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSN 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STAAC (Cell division protein ftsZ OS=Staphylococcus aureus (strain COL) GN=ftsZ PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47
Identity = 101/199 (50.75%), Postives = 128/199 (64.32%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            +NAVNRMI+  M  VEF  +NTD QA+ +S    E+++QIG++LTRGLGAG NPEIG              + GADMVF                     K MG LTVG+VT PFSFEGR+R  QA  G+ +++  VDTLIVIPND+LL  V +STP+ EAF  AD++LRQGV+GISD+I + G VN+DFADV+ I  N
Sbjct:   24 NNAVNRMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSN 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STAA8 (Cell division protein ftsZ OS=Staphylococcus aureus (strain NCTC 8325) GN=ftsZ PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47
Identity = 101/199 (50.75%), Postives = 128/199 (64.32%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            +NAVNRMI+  M  VEF  +NTD QA+ +S    E+++QIG++LTRGLGAG NPEIG              + GADMVF                     K MG LTVG+VT PFSFEGR+R  QA  G+ +++  VDTLIVIPND+LL  V +STP+ EAF  AD++LRQGV+GISD+I + G VN+DFADV+ I  N
Sbjct:   24 NNAVNRMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSN 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STAES (Cell division protein ftsZ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ftsZ PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47
Identity = 101/199 (50.75%), Postives = 127/199 (63.82%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            +NAVNRMI+  M  VEF  +NTD QA+ +S    E+++QIG++LTRGLGAG NPEIG              + GADMVF                     K MG LTVG+VT PF FEGR+R  QA  G+ S++  VDTLIVIPND+LL  V +STP+ EAF  AD++LRQGV+GISD+I + G VN+DFADV+ I  N
Sbjct:   24 NNAVNRMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTAGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFGFEGRKRQTQAAAGVESMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSN 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STAEQ (Cell division protein ftsZ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ftsZ PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47
Identity = 101/199 (50.75%), Postives = 127/199 (63.82%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            +NAVNRMI+  M  VEF  +NTD QA+ +S    E+++QIG++LTRGLGAG NPEIG              + GADMVF                     K MG LTVG+VT PF FEGR+R  QA  G+ S++  VDTLIVIPND+LL  V +STP+ EAF  AD++LRQGV+GISD+I + G VN+DFADV+ I  N
Sbjct:   24 NNAVNRMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTAGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFGFEGRKRQTQAAAGVESMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSN 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STRGR (Cell division protein ftsZ OS=Streptomyces griseus GN=ftsZ PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47
Identity = 97/195 (49.74%), Postives = 127/195 (65.13%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NA+NRMIE  +KGVEF  +NTD QA+ MS    + +L +G+ELTRGLGAG NP +G              L GADMVF                     +S+G LT+G+VT PF+FEGRRRA QA++GIA LR+ VDTLIVIPND+LL+   +   V +AF  AD +L  GV+GI+D+IT PGL+N+DFADV+++
Sbjct:   22 NAINRMIEVGLKGVEFIAINTDAQALLMSDA--DVKLDVGRELTRGLGAGANPAVGRKAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGRAPVVANIARSLGALTIGVVTRPFTFEGRRRANQAEDGIAELREEVDTLIVIPNDRLLSISDRQVSVLDAFKSADQVLLSGVQGITDLITTPGLINLDFADVKSV 214          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_STRCO (Cell division protein ftsZ OS=Streptomyces coelicolor GN=ftsZ PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47
Identity = 97/195 (49.74%), Postives = 127/195 (65.13%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NA+NRMIE  +KGVEF  +NTD QA+ MS    + +L +G+ELTRGLGAG NP +G              L GADMVF                     +S+G LT+G+VT PF+FEGRRRA QA++GIA LR+ VDTLIVIPND+LL+   +   V +AF  AD +L  GV+GI+D+IT PGL+N+DFADV+++
Sbjct:   22 NAINRMIEVGLKGVEFIAINTDAQALLMSDA--DVKLDVGRELTRGLGAGANPAVGRKAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGGAPVVANIARSLGALTIGVVTRPFTFEGRRRANQAEDGIAELREEVDTLIVIPNDRLLSISDRQVSVLDAFKSADQVLLSGVQGITDLITTPGLINLDFADVKSV 214          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_KOCRD (Cell division protein ftsZ OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=ftsZ PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.741e-46
Identity = 95/195 (48.72%), Postives = 127/195 (65.13%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NAVNRMIE  ++GVEF  +NTD QA+ MS    + +L +G+ELTRGLGAG NP++G              L GADMVF                     +S+G LT+G+VT PF+FEGRRR+ QA+ GI +LRD VDTLIVIPND+LL+   ++  + +AF  AD +L  GV GI+D+IT PGL+N+DFADV+++
Sbjct:   24 NAVNRMIEEGLRGVEFIAINTDAQALLMSDA--DVKLDVGRELTRGLGAGANPDVGRQAAEDHEEEIQEVLKGADMVFVTAGEGGGTGTGGAPVVARIARSLGALTIGVVTRPFTFEGRRRSNQAENGIETLRDEVDTLIVIPNDRLLSISDRNVSMLDAFKSADQVLLSGVSGITDLITTPGLINLDFADVKSV 216          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_CORGL (Cell division protein ftsZ OS=Corynebacterium glutamicum GN=ftsZ PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.056e-45
Identity = 98/195 (50.26%), Postives = 124/195 (63.59%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NAVNRMIE  +KGVEF  VNTD QA+  S    + +L IG+E TRGLGAG NPE+G              + GADMVF                     K MG LT+G+VT PF FEGRRR  QA+EGIA+L++  DTLIVIPND+LL     +  + EAF  AD++L  GV+GI+++ITIPG++NVDFADVR++
Sbjct:   22 NAVNRMIEEGLKGVEFIAVNTDSQALMFSDA--DVKLDIGREATRGLGAGANPEVGRASAEDHKNEIEETIKGADMVFVTAGEGGGTGTGAAPVVAGIAKKMGALTIGVVTKPFEFEGRRRTRQAEEGIAALKEVCDTLIVIPNDRLLELGDANLSIMEAFRAADEVLHNGVQGITNLITIPGVINVDFADVRSV 214          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_ENTFA (Cell division protein ftsZ OS=Enterococcus faecalis GN=ftsZ PE=3 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.073e-45
Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            NAVNRMIE  +KGVEF   NTDVQA++ S    E  +Q+G + TRGLGAG  PE+G              L GADM+F                     K +G LTVG+VT PFSFEG +R   A EGIA L++NVDTL++I N++LL  V + TP+ EAF  AD++LRQGV+GISD+IT PG VN+DFADV+ +  N
Sbjct:   26 NAVNRMIEENVKGVEFITANTDVQALKHSKA--ETVIQLGPKYTRGLGAGSQPEVGQKAAEESEQVISESLQGADMIFITAGMGGGTGTGAAPVVAKIAKELGALTVGVVTRPFSFEGPKRGRFAAEGIALLKENVDTLLIISNNRLLEVVDKKTPMLEAFREADNVLRQGVQGISDLITAPGYVNLDFADVKTVMEN 221          
The following BLAST results are available for this feature:
BLAST of FC868610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FTSZ_STAAM1.925e-4750.75Cell division protein ftsZ OS=Staphylococcus aureu... [more]
FTSZ_STAAC1.925e-4750.75Cell division protein ftsZ OS=Staphylococcus aureu... [more]
FTSZ_STAA81.925e-4750.75Cell division protein ftsZ OS=Staphylococcus aureu... [more]
FTSZ_STAES2.514e-4750.75Cell division protein ftsZ OS=Staphylococcus epide... [more]
FTSZ_STAEQ2.514e-4750.75Cell division protein ftsZ OS=Staphylococcus epide... [more]
FTSZ_STRGR9.552e-4749.74Cell division protein ftsZ OS=Streptomyces griseus... [more]
FTSZ_STRCO9.552e-4749.74Cell division protein ftsZ OS=Streptomyces coelico... [more]
FTSZ_KOCRD4.741e-4648.72Cell division protein ftsZ OS=Kocuria rhizophila (... [more]
FTSZ_CORGL1.056e-4550.26Cell division protein ftsZ OS=Corynebacterium glut... [more]
FTSZ_ENTFA3.073e-4549.49Cell division protein ftsZ OS=Enterococcus faecali... [more]

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Properties
Property NameValue
Genbank descriptionC31002F02EF AbioticL1 Citrus clementina cDNA clone C31002F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868610 ID=FC868610; Name=FC868610; organism=Citrus clementina; type=EST; length=701bp
GGATAGTCCTAGTGGAAGTGTCTCTGAGAGCATAGAAGAAGCATCTAGTC
CAAGTAGTTACAATGAAGCTAAGATCAAAGTTATTGGGGTCGGTGGTGGT
GGGTCAAATGCTGTTAATCGGATGATAGAGAGTGCAATGAAGGGTGTGGA
GTTCTGGATTGTCAATACTGATGTTCAAGCCATGAGAATGTCACCTGTTT
TTCCTGAGAATCGGTTACAAATTGGTCAGGAGCTAACTAGGGGGCTTGGT
GCTGGTGGGAACCCAGAGATTGGCATGAATGCAGCCAAAGAAAGCAAAGA
ATCAATAGAAGAGGCACTTTTTGGTGCTGACATGGTCTTTGTTACAGCTG
GAATGGGTGGAGGAACTGGCACTGGCGGGGCTCCTGTGATTGCAGGGGTT
GCGAAGTCGATGGGTATATTGACTGTTGGTATTGTTACAACCCCTTTTTC
TTTTGAGGGACGAAGAAGGGCAGTTCAAGCCCAGGAAGGAATTGCGTCTT
TGAGAGACAATGTTGATACACTGATCGTGATTCCAAATGACAAGTTATTG
ACTGCAGTTTCCCAGTCCACCCCTGTAACAGAGGCATTTAATCTAGCTGA
TGATATTCTTCGACAAGGTGTTCGTGGTATCTCTGATATAATTACGATCC
CTGGGCTCGTAAATGTGGATTTTGCCGATGTTCGAGCTATTTATGGCAAT
G
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