FC868610

Overview
NameFC868610
Unique NameFC868610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_ECOL6 (Cell division protein ftsZ OS=Escherichia coli O6 GN=ftsZ PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40
Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 2
Query:   62 NEAXXXXXXXXXXXSNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            N+A            NAV  M+   ++GVEF+ VNTD QA+R + V     +QIG  +T+GLGAG NPE+G N            L GADMVF                     K +GILTV +VT PF+FEG++R   A++GI  L  +VD+LI IPNDKLL  + +   + +AF  A+D+L+  V+GI+++IT PGL+NVDFADVR +
Sbjct:    9 NDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAV--GQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTV 216          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_ECO57 (Cell division protein ftsZ OS=Escherichia coli O157:H7 GN=ftsZ PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40
Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 2
Query:   62 NEAXXXXXXXXXXXSNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            N+A            NAV  M+   ++GVEF+ VNTD QA+R + V     +QIG  +T+GLGAG NPE+G N            L GADMVF                     K +GILTV +VT PF+FEG++R   A++GI  L  +VD+LI IPNDKLL  + +   + +AF  A+D+L+  V+GI+++IT PGL+NVDFADVR +
Sbjct:    9 NDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAV--GQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTV 216          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_BORBU (Cell division protein ftsZ OS=Borrelia burgdorferi GN=ftsZ PE=3 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40
Identity = 91/196 (46.43%), Postives = 121/196 (61.73%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            SNAVNRMIE  ++ VEF + NTD+QA++ S      ++ +G ++T GLGAGG PEIG              L GADMVF                     K +GILTVG+VT PF FEG ++   A++GI +LR +VDTLI+IPN KLLT V + T + +AF  ADD+LR GV+GI+ +I   G VN+DFADV++I
Sbjct:   33 SNAVNRMIEYGVRDVEFIVANTDLQALQTS--IAPIKIALGAKVTAGLGAGGKPEIGQAAAEEDIDVIRNHLSGADMVFITAGMGGGTGTGAAPVIAQVAKELGILTVGVVTKPFKFEGPKKLRLAEQGINNLRKSVDTLIIIPNQKLLTVVDKRTTIKDAFKRADDVLRMGVQGIAGLIIEHGEVNIDFADVKSI 226          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_BUCAI (Cell division protein ftsZ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsZ PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.077e-40
Identity = 86/196 (43.88%), Postives = 121/196 (61.73%), Query Frame = 2
Query:  104 SNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            SNAV  M+   ++GVEF+ +NTD QA+R   V     +QIG  +T+GLGAG NPEIG              L G+DMVF                     K +GILTV +VT PF+FEG++R + A++GI  L   VD+LI+IPNDKLL  +S+   + +AF+ A+++L+  V+GI+++IT PGL+NVDFADVR +
Sbjct:   23 SNAVEHMVRERIEGVEFFAINTDAQALRKIEV--GQTIQIGNNITKGLGAGANPEIGRTSAEEDKELLKSALDGSDMVFIAAGMGGGTGTGAAPVVAEIAKELGILTVAVVTKPFNFEGKKRMIVAEQGIIELSKYVDSLIIIPNDKLLKVLSRGISLLDAFSAANNVLKGAVQGIAELITRPGLMNVDFADVRTV 216          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_PSEPK (Cell division protein ftsZ OS=Pseudomonas putida (strain KT2440) GN=ftsZ PE=3 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.131e-39
Identity = 90/197 (45.69%), Postives = 116/197 (58.88%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYG 697
            NAVN M++S+++GVEF   NTD QA++   +     LQ+G  +T+GLGAG NPE+G              L G +MVF                     K MGILTV +VT PF FEGR+R   A EGI  L ++VD+LI IPN+KLLT + +   +  AF  ADD+L   VRGISDII  PG++NVDFADVR + G
Sbjct:   25 NAVNHMVKSSIEGVEFICANTDAQALKN--IGARTILQLGTGVTKGLGAGANPEVGRQAALEDRERIAEVLQGTNMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRMLAESVDSLITIPNEKLLTILGKDASLLSAFAKADDVLAGAVRGISDIIKRPGMINVDFADVRTVMG 219          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_CAUCR (Cell division protein ftsZ OS=Caulobacter crescentus GN=ftsZ PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.131e-39
Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NAVN MIE+ ++GVEF + NTD Q ++ +    + R+Q+G ++T+GLGAG +PE+GM+            L GA MVF                     +  GILTVG+VT PF FEGR R   A  GI  L+  VDTLIVIPN  L    ++ T   EAF +AD +L  GVR I+D++ +PGL+N+DFADVR +
Sbjct:   28 NAVNNMIEAGLEGVEFVVANTDAQQLQFAKT--DRRIQLGVQITQGLGAGAHPEVGMSAAEESFPEIGEHLDGAHMVFITAGMGGGTGTGAAPIIAKCARERGILTVGVVTKPFHFEGRHRMRLADSGIQELQRYVDTLIVIPNQNLFRVANERTTFAEAFGMADQVLHSGVRSITDLMVLPGLINLDFADVRTV 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_CAUCN (Cell division protein ftsZ OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=ftsZ PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.131e-39
Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NAVN MIE+ ++GVEF + NTD Q ++ +    + R+Q+G ++T+GLGAG +PE+GM+            L GA MVF                     +  GILTVG+VT PF FEGR R   A  GI  L+  VDTLIVIPN  L    ++ T   EAF +AD +L  GVR I+D++ +PGL+N+DFADVR +
Sbjct:   28 NAVNNMIEAGLEGVEFVVANTDAQQLQFAKT--DRRIQLGVQITQGLGAGAHPEVGMSAAEESFPEIGEHLDGAHMVFITAGMGGGTGTGAAPIIAKCARERGILTVGVVTKPFHFEGRHRMRLADSGIQELQRYVDTLIVIPNQNLFRVANERTTFAEAFGMADQVLHSGVRSITDLMVLPGLINLDFADVRTV 220          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_FRATH (Cell division protein ftsZ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=ftsZ PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.520e-39
Identity = 91/198 (45.96%), Postives = 118/198 (59.60%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIYGN 700
            NAV  M E  +  VEF+ +NTD QA+  S V  +N LQIG  LT+GLGAG NPEIG              L GADMVF                     K MGILTV +VT PF FEG RR   A++GI  L  +VD++I +PN+KLL+ + +   + +AFN A+D+L   V+G+S++IT PGL+NVDFADVRA+  N
Sbjct:   25 NAVQHMCEE-VSDVEFFALNTDGQALSKSKV--QNILQIGTNLTKGLGAGANPEIGKRAATEDRAKIEQLLEGADMVFITAGMGGGTGTGGAPVVAEVAKEMGILTVAVVTKPFPFEGPRRMKAAEQGIDELTKHVDSIITVPNEKLLSVLGKGASLIDAFNAANDVLGNAVKGVSELITKPGLINVDFADVRAVMTN 219          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_SODGL (Cell division protein ftsZ OS=Sodalis glossinidius GN=ftsZ PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 87/210 (41.43%), Postives = 121/210 (57.62%), Query Frame = 2
Query:   62 NEAXXXXXXXXXXXSNAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            N+A            NAV  M+   ++GV+F+ VNTD QA+R + V     +QIG  +T+GLGAG NPE+G +            L GADMVF                     K  GILTV +V  PF+FEG++R   A++GIA L  +VD+LI IPNDKLL  + +   + +AF  A+D+L+  V+GI+++IT PGL+NVDFADVR +
Sbjct:    9 NDAVIKVIGVGGGGGNAVEHMVRERIEGVDFFAVNTDAQALRKTAV--GQTIQIGSGITKGLGAGANPEVGRHSAEEDREALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVAKDQGILTVAVVAKPFNFEGKKRMAFAEQGIAELSKHVDSLITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTV 216          
BLAST of FC868610 vs. ExPASy Swiss-Prot
Match: FTSZ_PSEAE (Cell division protein ftsZ OS=Pseudomonas aeruginosa GN=ftsZ PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39
Identity = 89/195 (45.64%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  107 NAVNRMIESAMKGVEFWIVNTDVQAMRMSPVFPENRLQIGQELTRGLGAGGNPEIGMNXXXXXXXXXXXXLFGADMVFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAI 691
            NAVN M ++ ++GVEF   NTD QA++   +     LQ+G  +T+GLGAG NPE+G              L GADMVF                     K MGILTV +VT PF FEGR+R   A EGI +L ++VD+LI IPN+KLLT + +   +  AF  ADD+L   VRGISDII  PG++NVDFADV+ +
Sbjct:   25 NAVNHMAKNNVEGVEFICANTDAQALKN--IAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTV 217          
The following BLAST results are available for this feature:
BLAST of FC868610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FTSZ_ECOL61.745e-4042.38Cell division protein ftsZ OS=Escherichia coli O6 ... [more]
FTSZ_ECO571.745e-4042.38Cell division protein ftsZ OS=Escherichia coli O15... [more]
FTSZ_BORBU1.745e-4046.43Cell division protein ftsZ OS=Borrelia burgdorferi... [more]
FTSZ_BUCAI5.077e-4043.88Cell division protein ftsZ OS=Buchnera aphidicola ... [more]
FTSZ_PSEPK1.131e-3945.69Cell division protein ftsZ OS=Pseudomonas putida (... [more]
FTSZ_CAUCR1.131e-3943.59Cell division protein ftsZ OS=Caulobacter crescent... [more]
FTSZ_CAUCN1.131e-3943.59Cell division protein ftsZ OS=Caulobacter crescent... [more]
FTSZ_FRATH2.520e-3945.96Cell division protein ftsZ OS=Francisella tularens... [more]
FTSZ_SODGL3.291e-3941.43Cell division protein ftsZ OS=Sodalis glossinidius... [more]
FTSZ_PSEAE7.331e-3945.64Cell division protein ftsZ OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionC31002F02EF AbioticL1 Citrus clementina cDNA clone C31002F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868610 ID=FC868610; Name=FC868610; organism=Citrus clementina; type=EST; length=701bp
GGATAGTCCTAGTGGAAGTGTCTCTGAGAGCATAGAAGAAGCATCTAGTC
CAAGTAGTTACAATGAAGCTAAGATCAAAGTTATTGGGGTCGGTGGTGGT
GGGTCAAATGCTGTTAATCGGATGATAGAGAGTGCAATGAAGGGTGTGGA
GTTCTGGATTGTCAATACTGATGTTCAAGCCATGAGAATGTCACCTGTTT
TTCCTGAGAATCGGTTACAAATTGGTCAGGAGCTAACTAGGGGGCTTGGT
GCTGGTGGGAACCCAGAGATTGGCATGAATGCAGCCAAAGAAAGCAAAGA
ATCAATAGAAGAGGCACTTTTTGGTGCTGACATGGTCTTTGTTACAGCTG
GAATGGGTGGAGGAACTGGCACTGGCGGGGCTCCTGTGATTGCAGGGGTT
GCGAAGTCGATGGGTATATTGACTGTTGGTATTGTTACAACCCCTTTTTC
TTTTGAGGGACGAAGAAGGGCAGTTCAAGCCCAGGAAGGAATTGCGTCTT
TGAGAGACAATGTTGATACACTGATCGTGATTCCAAATGACAAGTTATTG
ACTGCAGTTTCCCAGTCCACCCCTGTAACAGAGGCATTTAATCTAGCTGA
TGATATTCTTCGACAAGGTGTTCGTGGTATCTCTGATATAATTACGATCC
CTGGGCTCGTAAATGTGGATTTTGCCGATGTTCGAGCTATTTATGGCAAT
G
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