FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46
Identity = 92/212 (43.40%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46
Identity = 92/212 (43.40%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46
Identity = 98/211 (46.45%), Postives = 143/211 (67.77%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E QN I+Y+  +S K+ +++PFLEKL +K IEVLY+++ IDE AI  L+ F  KK V  +KE L+L + EDE K++E  K++F  LC  IK  LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+ +L        +    K  V LL++TAL++SGF+ D P   G++I+ M+ + L
Sbjct:  457 EGQNDIFYITGESKKAVENSPFLEKLKKKGIEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGL 667          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46
Identity = 92/212 (43.40%), Postives = 140/212 (66.04%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   +  F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANPAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46
Identity = 92/212 (43.40%), Postives = 139/212 (65.57%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K+   E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L        +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  479 ESQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKTLVSVTKEGLELPEDEEEKKNMEESKAKFETLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKADANKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 690          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.003e-45
Identity = 98/227 (43.17%), Postives = 146/227 (64.32%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q+ IYY+  +S K+ +++PFLEKL +K  EVLY+++ IDE A+  L+ F  KK V  +KE L+L + ++ K+R  E K++F  LC  IK+ LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+ +L        +    K  V LL++TAL++SGF+ + P   G +I+ M+ + L         DE ES E
Sbjct:  459 EGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGL-------SIDEDESAE 678          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.003e-45
Identity = 98/227 (43.17%), Postives = 146/227 (64.32%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q+ IYY+  +S K+ +++PFLEKL +K  EVLY+++ IDE A+  L+ F  KK V  +KE L+L + ++ K+R  E K++F  LC  IK+ LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+ +L        +    K  V LL++TAL++SGF+ + P   G +I+ M+ + L         DE ES E
Sbjct:  459 EGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGL-------SIDEDESAE 678          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.310e-45
Identity = 94/212 (44.34%), Postives = 140/212 (66.04%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEV---KERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IYY+  +S K+ +++PFLE+L +K  EVL++++ IDE A+  L+ ++ KK V  +KE L+L D+DE    K  E K+ F  LC  IK  LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINPD+ I+++L    +   +    K  V LL++TAL++SGF+ D P   G +I+ M+ + L
Sbjct:  462 EGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREEKKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGL 673          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.310e-45
Identity = 91/212 (42.92%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV +V +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 1.711e-45
Identity = 95/212 (44.81%), Postives = 139/212 (65.57%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG-DEDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IY++  +S+   K++ F+E++ ++  EV+Y+ EPIDE  IQ L+ +  K+ V ++KE LEL  DE E K+RE  K +F  LC  +K  L  KV KV VS RL  SPC +V+ ++GWSANMER+MKAQAL D+S++ +M G++ LEINPDH I++ L    +   +    K  V LL++TAL+SSGF+ D P    ++IY M+ + LG
Sbjct:  466 ENQTQIYFITGESIDQVKNSAFVERVKKRGFEVIYMTEPIDEYVIQQLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFENLCKVMKSVLESKVEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGLG 677          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HS90B_HORSE4.504e-4643.40Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN4.504e-4643.40Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HSP83_ARATH7.682e-4646.45Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HS90B_MOUSE7.682e-4643.40Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_CHICK7.682e-4643.40Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HSP83_ORYSJ1.003e-4543.17Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ1.003e-4543.17Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_IPONI1.310e-4544.34Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HS90B_PONAB1.310e-4542.92Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HSP83_ANOGA1.711e-4544.81Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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