FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFA (Chaperone protein htpG OS=Xylella fastidiosa GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 70/212 (33.02%), Postives = 115/212 (54.25%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEF----NLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDL---LYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ +YYL  +S    K +P+LE   +K IEVL L++ IDE  +  L  F+ K FVDI++ DL+LG+ D   +++ ++E       L   IK  LG+ VA+V+VS RL+ SP VL  G+      M +L++A      S  +    + + E NP HP+++ L+A         D  R  DL   L+D A +++G +   PA+   ++ +++
Sbjct:  434 EGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFVDIARGDLDLGNLDSEADKKAQEEIAKTKEALASRIKATLGEDVAEVRVSHRLTDSPAVLAIGEGDLGLQMRQLLEA------SGQKVPETKPVFEFNPSHPLIEKLDA-------EQDMDRFADLSHILFDQAALAAGDSLKDPANYVRRLNKLL 632          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 70/212 (33.02%), Postives = 119/212 (56.13%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDL---LYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IYY+  D+L +AK++P LE   +K +EVL L + +DE    +L  F+ K    ++K  L+LG    + D+  +++ ++    + + +++ LGDKV +V+ + RL  SP  LV+G+   SA++ER++KA      +  +    +  LEINP+H +VK L        + +D  RA DL   LYD AL++ G   + PA    +I ++M
Sbjct:  428 EGQDKIYYITADTLAAAKNSPHLEVFKKKGVEVLLLTDRVDEWVTGSLFEFDGKALQSVAKGALDLGALEDEADKEAQKQVEEASKPVVEKVQKALGDKVKEVRATARLVESPACLVAGEHDMSAHLERMLKA------AGQKIEGSKPTLEINPEHVLVKRL-------AEESDEARAGDLAAVLYDQALLAEGGKLEDPASFVKRINKLM 626          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 68/197 (34.52%), Postives = 111/197 (56.35%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q+ IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  L  F+ K    +++ DL+LG   DE++  + +  +    + + +K+ LGDKV +V+V+ RL+ SP  LV+     S  ++R++KA      +       + ILEINP+H +VK LNA      DS D      LL+D AL++ G   D PA
Sbjct:  433 EQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQLNA------DSADFGDWCHLLFDQALLAEGGMLDDPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 68/197 (34.52%), Postives = 111/197 (56.35%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q+ IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  L  F+ K    +++ DL+LG   DE++  + +  +    + + +K+ LGDKV +V+V+ RL+ SP  LV+     S  ++R++KA      +       + ILEINP+H +VK LNA      DS D      LL+D AL++ G   D PA
Sbjct:  433 EQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQLNA------DSADFGDWCHLLFDQALLAEGGMLDDPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23
Identity = 72/213 (33.80%), Postives = 114/213 (53.52%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKE--DLELGDEDEVKERETKQ-EFNL--LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            E Q  IYY+  DSL    ++P+LEKL +K  EVL L++P+DE  +  L  F  KK   I +E  DL+  +E + KE+E KQ E  L  + + +K+ L   V  V +S RL+++P  LV+     SA+M++LM              + +RI+EINP+HP+ + +    K +P+     +  ++LY  AL++ G     P     +I E+M  A
Sbjct:  416 ETQKDIYYITGDSLSQVSNSPYLEKLKEKGFEVLLLVDPVDEWVVDALSEFKGKKLQSIMREGLDLDTAEEKQQKEQEKKQAEVTLKPVLESMKKTLESDVKDVVLSDRLTNTPACLVASSADPSAHMQKLMAQMG----KEYAGQQVKRIMEINPNHPVFEKM---LKASPE--QQTKWAEILYAQALLTEGSNLPDPVKFSQQIAELMVQA 619          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 72/206 (34.95%), Postives = 114/206 (55.34%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFN--EKKFVDISKEDLELGDEDEVKERETKQ-EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            Q AIYY+  +  K+ + +P LE   QK  EVL + + ID++ I +L  +   E K  + +  D EL  E+E KE E K+ +F  + + IK+ LGDKV +V+ SKRLS SP  +V  +   S  MER+M+A    +TS++     + ILE+N DHP+V+ L    K++ D    +   +LL + AL+       +P D   ++  +M
Sbjct:  440 QKAIYYITGEDEKTLRQSPHLEVYKQKGFEVLIMPDEIDDIIIPSLGKYKDWELKAANRAGSDKELNTEEETKEAEKKEKDFKPVLEKIKEVLGDKVKEVRFSKRLSDSPSCIVVDETDPSLQMERMMRAMGQFNTSAV-----KPILEVNADHPLVQKL----KDSKDKEFVEDMSNLLLEQALLVESGELKAPVDFVKRLNRLM 636          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 71/209 (33.97%), Postives = 114/209 (54.55%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQE-FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q AIYYL  D+L +AK++P LE   +K IEV+ +   +DE A+  L +F+E    +I+K  ++LG   DE E  E E  QE    + D +K  LG++   V+VS RL  SP  LV G+   S  M +++K          +    +  LE+NPDHP++K L ++ ++A    D  +   +++D AL++ G   D PA    ++ E++
Sbjct:  465 EGQKAIYYLTADNLAAAKNSPQLELFKKKGIEVILMTSRVDEWAMNFLTSFDETPLQNIAKGAVDLGDLQDEAEKAEAEKAQETMKPIVDKLKTALGERAKDVKVSTRLVDSPACLVVGEGELSPQMIQMLKQM------GQDVPESKPTLEVNPDHPLIKKLESSEQSA---EDFDKLAQVIFDQALLADGGQLDDPAAYLRRVNELL 664          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 68/197 (34.52%), Postives = 109/197 (55.33%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q  IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  L  F+ K    +++ DL+LG   D+++  + ET +    + D +K+ LG+KV  V+V+ RL+ SP  LV+     S  ++R++KA      S       + ILEINP+HP+VK L A      D  D      LL+D AL++ G   + PA
Sbjct:  433 EQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSF------QPILEINPEHPLVKALKA------DGADFGDWCHLLFDQALLAEGGALEDPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 68/197 (34.52%), Postives = 109/197 (55.33%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q  IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  L  F+ K    +++ DL+LG   D+++  + ET +    + D +K+ LG+KV  V+V+ RL+ SP  LV+     S  ++R++KA      S       + ILEINP+HP+VK L A      D  D      LL+D AL++ G   + PA
Sbjct:  433 EQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSF------QPILEINPEHPLVKALKA------DGADFGDWCHLLFDQALLAEGGALEDPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURP1 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 68/197 (34.52%), Postives = 109/197 (55.33%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q  IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  L  F+ K    +++ DL+LG   D+++  + ET +    + D +K+ LG+KV  V+V+ RL+ SP  LV+     S  ++R++KA      S       + ILEINP+HP+VK L A      D  D      LL+D AL++ G   + PA
Sbjct:  433 EQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSF------QPILEINPEHPLVKALKA------DGADFGDWCHLLFDQALLAEGGALEDPA 617          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_XYLFA1.079e-2333.02Chaperone protein htpG OS=Xylella fastidiosa GN=ht... [more]
HTPG_CHRVO1.079e-2333.02Chaperone protein htpG OS=Chromobacterium violaceu... [more]
HTPG_BURCH1.079e-2334.52Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA1.079e-2334.52Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BDEBA1.841e-2333.80Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HTPG_TREDE2.405e-2334.95Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_PSYCK2.405e-2333.97Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_BURPS2.405e-2334.52Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP62.405e-2334.52Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP12.405e-2334.52Chaperone protein htpG OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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