FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23
Identity = 67/197 (34.01%), Postives = 110/197 (55.84%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q+ IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  L  F+ K    +++ DL+LG   DE++  + +  +    + + +K+ LGDKV +V+V+ RL+ SP  LV+     S  ++R++KA      +       + ILEINP+H +VK LNA      DS        LL+D AL++ G   D PA
Sbjct:  433 EQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQLNA------DSASFGDWCHLLFDQALLAEGGMLDDPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23
Identity = 76/215 (35.35%), Postives = 119/215 (55.35%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGG 635
            E Q+ IYY+  DS  +AK++P LE L +K IEVL L + +DE    +L  F  K    ++K  L+LG    +E+   + ET+++   L + IK  LG++V  V+VS RL+SSP  +V G+   +  M++L+K QA  + SS      + +LEINP HP++    A  +   D T       LL D A+++ G   + PA    +I ++M +AL G
Sbjct:  426 EGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK-QAGHEISST-----KPVLEINPTHPML----ARIEGEKDDTRFAEWSALLLDQAILAEGGQLEDPAGFVARINQLM-LALAG 629          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF2 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23
Identity = 76/215 (35.35%), Postives = 119/215 (55.35%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGG 635
            E Q+ IYY+  DS  +AK++P LE L +K IEVL L + +DE    +L  F  K    ++K  L+LG    +E+   + ET+++   L + IK  LG++V  V+VS RL+SSP  +V G+   +  M++L+K QA  + SS      + +LEINP HP++    A  +   D T       LL D A+++ G   + PA    +I ++M +AL G
Sbjct:  426 EGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK-QAGHEISST-----KPVLEINPTHPML----ARIEGEKDDTRFAEWSALLLDQAILAEGGQLEDPAGFVARINQLM-LALAG 629          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RUTMC (Chaperone protein htpG OS=Ruthia magnifica subsp. Calyptogena magnifica GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 72/207 (34.78%), Postives = 111/207 (53.62%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVK--ERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            Q AIYY+  ++ ++AK +P LE   QKDIEVL L + +DE  + N   F +     I+K DLE  D  E K  + E  + F  + + +++ L  +V +++VS RLS SP  LV  +     NMER+MK+  Q + DT        + ILEINP+HP+VK L             +  V +L+D A++S G     PA+   +I +++
Sbjct:  425 QKAIYYITAETYEAAKGSPHLEIFNQKDIEVLLLSDRVDEWMVNNFGKFEDVPLKSITKGDLEGLDSKEEKKAKEEVSKNFEKVIEKMQKILDTQVKEIKVSSRLSDSPSCLVVDENEMGGNMERIMKSLGQDVPDT--------KPILEINPNHPLVKKLKTKID--------EDLVKVLFDQAVLSEGVQLKDPAEFVKRINKLI 615          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 70/207 (33.82%), Postives = 113/207 (54.59%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQE-FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            Q AIYYL  D+L +AK++P LE   +K IEV+ +   +DE A+  L +F+E    +I+K  ++LG   DE E  E E  QE    + D +K  LGD+   V+VS RL  SP  LV G+   S  M +++K          +    +  LE+NPDHP++K L ++ ++A    D  +   +++D AL++ G   + PA    ++ E++
Sbjct:  457 QKAIYYLTADNLAAAKNSPQLELFKKKGIEVILMTSRVDEWAMNFLTSFDETPLQNIAKGAVDLGDLQDEAEKAEAEKAQETMKPVVDKLKAALGDRAKDVKVSTRLVDSPACLVVGEGELSPQMIQMLKQM------GQDVPESKPTLEVNPDHPLIKKLESSEQSA---EDFDKLAQVIFDQALLADGGQLEDPAAYLRRVNELL 654          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/199 (33.67%), Postives = 110/199 (55.28%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            E Q+ IYY+  DS  +AKS+P LE   +K IEVL L + +DE  + +L  F  K    ++K +L+LG    ++++ +++E +++F  L + +K  LGDKV +V+V+ RL+ SP  LV  +   S  +ERL+K       +  +    + ILE+NP HPI+    A  K      +      LL++ AL++ G   + PA
Sbjct:  431 EGQDKIYYITADSFPAAKSSPHLEVFRKKGIEVLLLSDRVDEWLVASLPEFEGKSLQSVTKGELDLGHLEDEQEKQQQKEVEEDFQNLVERVKNNLGDKVKEVRVTHRLTDSPVCLVVEQHDMSGYLERLLK------EAGQQAPHIQPILELNPAHPII----ARLKGEESEENFGDWAHLLFEQALLAEGGRLEEPA 619          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 71/208 (34.13%), Postives = 113/208 (54.33%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQ-EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            +Q  IYY+  D LK+A+S+P LE   +K IEVL L + IDE  + NL  +  K    I+K +L+LG   DE+E KE E +  +F  L + +K+ LG++V  V+++ RL+ SP  LV+     S N+ RL+K+       S  F      LEINP HP+++ L        D +       +L+D AL++ G   + PA    ++ +++
Sbjct:  437 EQEKIYYITADGLKAAQSSPHLEIFRKKGIEVLLLCDRIDEWLVANLNEYTGKSLQSIAKGNLDLGKLEDEEEKKEHEKEAGDFQELTNKMKEVLGEQVKDVRITYRLTESPACLVADTHDVSGNLGRLLKSAGQKVPDSKPF------LEINPHHPMIQRLKYEEAKFADWS------HILFDQALLAEGGQLEDPAGFVKRLNDLL 632          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 71/219 (32.42%), Postives = 116/219 (52.97%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKF-------VDISKE--DLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  ++Y++  + ++A+  P +E   +K IEVLYL E  DE  +++L  +NE +F        D  K+  D+E  D  E  + E ++  + L   +K  LGDKV  V+ S RLS SP  L S   G +A+ME+LM+     ++        R++LEINPDHP+ ++L    +   D     +A + LY++AL+  G+  D P  L  ++  ++  A G
Sbjct:  417 EGQKTVWYVSAPNREAARLNPHVEIFRRKGIEVLYLYEAADEFIMESLGKWNEFEFRSAEHADADALKDFDDVEKKDAPEALDEEGRKTLSSLLSHMKTLLGDKVEDVRESARLSDSPACLASKDGGMTASMEKLMRVMNKDESVP------RKVLEINPDHPLTRNLLRLYRADADDRLLAQATEQLYESALLLEGYLRD-PHALVGRVNSLLEQATG 628          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_DECAR (Chaperone protein htpG OS=Dechloromonas aromatica (strain RCB) GN=htpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22
Identity = 75/216 (34.72%), Postives = 114/216 (52.78%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQ---EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGR 638
            E Q  IY++  D+  +AK++P LE   +K IEVL L + +DE  + +L  F+ K    ++K  L+LG  EDE +++E ++   ++  L + +K  LGDKV  V+V+ RL+ SP  LVS +   S N+ RLMKA      +       + ILEINP HP V  L        D         LL++ A ++ G   D PA    +I ++M MAL  +
Sbjct:  434 EGQEKIYFVTADTFNAAKNSPHLEIFRKKGIEVLLLSDRVDEWVVGHLTEFDGKHLQSVAKGGLDLGKLEDEAEKQEAEKAADDYKELLEKVKTSLGDKVKDVRVTYRLTDSPSCLVSDEHDPSGNLARLMKA------AGQPMPNSKPILEINPQHPAVMRLKYEESRFDD------WAALLFEQATLAEGGQLDDPAGFVKRINDLM-MALSAK 636          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NOCFA (Chaperone protein htpG OS=Nocardia farcinica GN=htpG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22
Identity = 66/220 (30.00%), Postives = 114/220 (51.82%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERET-----KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKR------AVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q+AIYY+  +S +  +S+P +E    K  EVL L +P+DE+ + ++  F+ K+F  I+K +++L  E+E K  E       +EF  L  W+ + L + + +V+++ RL++SP  LV   F ++  +ER+ +A      S       +RILE+NP HP+V  L  A        D  +        +LLY TA+++ G     PA   + + + +   L
Sbjct:  439 EGQDAIYYMTGESRQQVESSPHMEAFKAKGREVLILTDPVDEMWVGSVPEFDGKRFQSIAKGEVDLESEEEKKASEALREQQDKEFADLLSWLGKTLEENIKEVRLTNRLTTSPACLVGDVFDFTPMLERMYRA------SGQPVPVSKRILELNPTHPLVTGLRDAYDQRKQDADEGKVPELTETAELLYGTAVLAEGGELKDPARFAHILTDRLTRTL 652          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_BURCM5.357e-2334.01Chaperone protein htpG OS=Burkholderia ambifaria (... [more]
HTPG_ACIF55.357e-2335.35Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_ACIF25.357e-2335.35Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_RUTMC6.997e-2334.78Chaperone protein htpG OS=Ruthia magnifica subsp. ... [more]
HTPG_PSYA26.997e-2333.82Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_NITOC6.997e-2333.67Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_NITEU9.138e-2334.13Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
HTPG_DESDG9.138e-2332.42Chaperone protein htpG OS=Desulfovibrio desulfuric... [more]
HTPG_DECAR1.193e-2234.72Chaperone protein htpG OS=Dechloromonas aromatica ... [more]
HTPG_NOCFA1.559e-2230.00Chaperone protein htpG OS=Nocardia farcinica GN=ht... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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