FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22
Identity = 66/190 (34.74%), Postives = 108/190 (56.84%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNL----LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALIS 560
            E Q+ IYY+  DS ++A ++P LE L +K IEVL + E IDE  I +L  F+ KK   +++ DLELG+ ++  E+E +++       L   +K  LGDKV++V+V+ RL+ +P  +V+G+   S  M +LM+A      +  +    +   E+NP+HP+V  LN    +  D     +  +LL   AL+S
Sbjct:  435 EGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDDDEKEAQEKLQTESEGLVKRVKDSLGDKVSEVKVTTRLTDTPACVVAGEGEMSTQMIKLMQA------AGQDVPEPKPTFELNPEHPLVARLN----DEQDEQQFAQWSELLLQQALLS 614          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22
Identity = 65/209 (31.10%), Postives = 114/209 (54.55%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IYYL  +S    K++P LE   +K IEVL L + IDE  +  L  F+ K+FVD+++ DL+LG    +ED+  + E  +    L + +K+ L ++V++V+VS RL+ SP +L  G+      M ++++A      S  +    + I EINP HP+++ L+A     PD         +L+D A +++G +   P     ++ +++
Sbjct:  431 EGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPEFDGKQFVDVARGDLDLGSLDSEEDKKAQEEVAKSKEGLIERLKKVLDEQVSEVRVSHRLTDSPAILAIGEQDLGLQMRQILEA------SGQKVPDSKPIFEINPQHPLIEKLDA----EPDEDRFGELSHILFDQAALAAGDSLKDPGAYVRRLNKLL 629          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22
Identity = 68/207 (32.85%), Postives = 112/207 (54.11%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNL--LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IYY+   S  +AK++P LE   +K IEVL L + +DE  +  +  F  KK   ISK  +ELGD DE  E+  +QE  L  L   IK  L ++V  V ++ RL+ SP  +V+ +      M+R+++A      +  +    + I EINPDH ++K L+    +  D    +  V +L++ A+++ G   D+PAD  N++  ++
Sbjct:  425 EGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSISKGKIELGD-DETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA------AGQQVPVSKPIFEINPDHALIKRLH----DIQDDNQFELWVTMLFEQAVLAEGGQLDNPADFVNRVNRLL 620          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22
Identity = 67/212 (31.60%), Postives = 114/212 (53.77%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNL----LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            E Q  IYY+  DS  +AK++P LE   +K +EVL + E +DE  + +L  F+ K+ V +++ +L+LGD ++   ++ ++E       L + +KQ LG+ V +V+V+ RL+ SP  +V+   G S  M +LM+A      +       + ILE+NPDH +VK L A      D       V LL++ A ++     + PA   ++I  ++  A
Sbjct:  440 EGQQKIYYITADSYAAAKNSPHLEIFRKKGVEVLLMWERVDEWLMSHLTEFDGKQLVSVTRGELDLGDLEDEASKQAQEEAEKANAGLVERVKQSLGEAVKEVRVTHRLTDSPSCIVTDAHGMSTQMIKLMRA------AGQPVPEQKYILELNPDHALVKKLGA----IEDEALFGEWVTLLHEQAQLAEQGGLNDPASFVSRINRLLLQA 641          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_VESOH (Chaperone protein htpG OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 69/209 (33.01%), Postives = 116/209 (55.50%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            Q AIYY+  ++ ++AK +P LE   QK+IEVL L + +DE  + N + F+  +   I+K +LE  D D  +E++ K+E    F ++ + +++ L  +V ++++S RLS SP  LV+ +     NMER+MK+  Q + DT        + ILEINP H +VK L             +  V +L+D A++S G     PA+   +I +++
Sbjct:  425 QKAIYYITAETYETAKGSPHLENFNQKNIEVLLLSDRVDEWMVSNFREFDGIQLKSIAKGNLE--DFDSKEEKKAKEEVAKNFEIVIEKMQKILDSQVKEIKISSRLSESPSCLVADENEMGGNMERIMKSLGQDIPDT--------KPILEINPTHSLVKKLKTKID--------EDLVKVLFDQAVLSEGGQLKDPAEFVKRINKLI 615          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_PSEMY (Chaperone protein htpG OS=Pseudomonas mendocina (strain ymp) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDL---LYDTALISSGFTPDSPADLGNKIYEMM 617
            Q+ IYYL  +S    K++P LE   +K IEVL L + IDE  +  L  F+ K+FVD+++ DL+LG    +ED+  + E  +    L + +K  LG++V +V+VS RL+ SP +L  G+      M ++++A      S  +    + I E NP HP+++ L+A         D  R VDL   L+D A +++G +   PA    ++ +++
Sbjct:  433 QDKIYYLTGESYAQIKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKQFVDVARGDLDLGKLDSEEDKKAQEEVAKAKEGLIERLKGALGEQVKEVRVSHRLTDSPAILAIGEQDLGLQMRQILEA------SGQKVPESKPIFEFNPSHPLIERLDA-------EADEDRFVDLTHILFDQAALAAGDSLKDPAAYVQRLNKLL 629          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 72/218 (33.03%), Postives = 108/218 (49.54%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKF-------VDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGG 635
            Q+AIY +  D L   K +P LE    K +EVL L +PIDE  +  ++++ EK F        D+SK     G ED+  +     E   L + +K  LG++V  V+ S+RL+ S   LV+ +   S ++E++++A  QA G+ +        RILEINP H ++K L A  K        + A  LL D A I  G  P  PA    ++  +M   L G
Sbjct:  414 QDAIYTITGDDLDQLKKSPQLEGFAAKGVEVLLLTDPIDEFWVSAVRSYAEKDFRSVAAAGADLSKVKAPEGAEDKKADEAPADELTTLIEAVKLALGERVKDVRPSERLTESAVCLVAAEGEMSMHLEKMLRAHNQAPGERA--------RILEINPRHALIKGLAARVKAGGTDAGLEDAAFLLLDQARIIEGEPPADPAAFARRMVSVMEKGLLG 623          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 68/207 (32.85%), Postives = 112/207 (54.11%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNL--LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IYY+   S  +AK++P LE   +K IEVL L + +DE  +  +  F  KK   ISK  +ELGD DE  E+  +QE  L  L   IK  L ++V  V ++ RL+ SP  +V+ +      M+R+++A      +  +    + I EINPDH ++K L+    +  D    +  V +L++ A+++ G   D+PAD  N++  ++
Sbjct:  425 EGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSISKGKVELGD-DETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA------AGQQVPVSKPIFEINPDHALIKRLH----DIQDDNQFELWVTMLFEQAVLAEGGQLDNPADFVNRVNRLL 620          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_XANOR (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae GN=htpG PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21
Identity = 69/212 (32.55%), Postives = 110/212 (51.89%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDL---LYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ +YYL  +S    K +P LE   +K IEVL L + IDE  +  L  F+ K FVD+++ DL+LG    +ED+  + E  +    L   IK  LG+ VA+V+VS RL+ SP +L  G+      M +L++A      S       + + E NP HP+++ L+A         D  R  DL   L+D A +++G +   PA    ++ +++
Sbjct:  431 EGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSKEGLASRIKAALGEDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPESKPVFEFNPTHPLIEKLDA-------EQDMDRFCDLSQVLFDQAALAAGDSLKDPAGYVKRLNKLL 629          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_XANOM (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21
Identity = 69/212 (32.55%), Postives = 110/212 (51.89%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDL---LYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ +YYL  +S    K +P LE   +K IEVL L + IDE  +  L  F+ K FVD+++ DL+LG    +ED+  + E  +    L   IK  LG+ VA+V+VS RL+ SP +L  G+      M +L++A      S       + + E NP HP+++ L+A         D  R  DL   L+D A +++G +   PA    ++ +++
Sbjct:  431 EGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSKEGLASRIKAALGEDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPESKPVFEFNPTHPLIEKLDA-------EQDMDRFCDLSQVLFDQAALAAGDSLKDPAGYVKRLNKLL 629          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_SHEPA5.923e-2234.74Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_PSEAE5.923e-2231.10Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]
HTPG_LEGPC5.923e-2232.85Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_AERHH5.923e-2231.60Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_VESOH7.736e-2233.01Chaperone protein htpG OS=Vesicomyosocius okutanii... [more]
HTPG_PSEMY7.736e-2232.38Chaperone protein htpG OS=Pseudomonas mendocina (s... [more]
HTPG_MAGSA7.736e-2233.03Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HTPG_LEGPH7.736e-2232.85Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_XANOR1.010e-2132.55Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_XANOM1.010e-2132.55Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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