FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.711e-45
Identity = 98/228 (42.98%), Postives = 147/228 (64.47%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q  IYY+  +S K+ +++PFLE+L +K  EVLY+++ IDE A+  L+ ++ KK V  +KE L+L D   E++ K+ E K+ F  LC  IK  LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINPD+ I+++L    +   +    K  V LL++TAL++SGF+ D P     +I+ M+ +      G S  +E E+VE
Sbjct:  258 EGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDDSEEEKKKKEEKKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKL------GLSIDEEEEAVE 479          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.711e-45
Identity = 93/211 (44.08%), Postives = 141/211 (66.82%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL--GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E QN IYY+  +S K+ +++PFLEKL +K  EVLY+++ IDE +I  L+ F  KK V  +KE L+L   ++++ K+ E K++F  LC  +K  LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+ +L        +    K  V LL++TAL++SGF+ + P   GN+I+ M+ + L
Sbjct:  457 EGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGL 667          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.980e-45
Identity = 93/224 (41.52%), Postives = 143/224 (63.84%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAE 668
            E Q  IYY+  DS K  +++PF+E+  ++  EVL++ EPIDE  +Q ++ F +KKF  ++KE +   + +E K++  E K  +  LC  +K  LGDKV KV VS+RL++SPC+LV+ +FGWSA+ME++M+ QAL D+S   +M  ++ +EINP HPIVK+L    +   +    K  V LL+DTAL++SGFT D P     +I+ M+ + L      +  +EAE
Sbjct:  461 EGQKCIYYVTGDSKKKLETSPFIEQARRRGFEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKTAYERLCKAMKDVLGDKVEKVVVSERLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMSKKTMEINPAHPIVKELKRRVEADENDKAVKDLVYLLFDTALLTSGFTLDDPTSYAERIHRMIKLGLSLDDEDNGNEEAE 684          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.980e-45
Identity = 95/212 (44.81%), Postives = 139/212 (65.57%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG-DEDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            + Q  +Y++  +S     ++ F+E++  +  EV+Y+ EPIDE  IQ+L+ +  K+ V ++KE LEL  DE E K+RE  K +F  LC  +K  L +KV KV VS RL  SPC +V+ +FGWSANMER+MKAQAL DT+++ +M G++ LEINPDHPIV+ L        +    K  V LL++T+L+SSGF+ DSP    ++IY M+ + LG
Sbjct:  471 DNQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLG 682          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.980e-45
Identity = 98/228 (42.98%), Postives = 145/228 (63.60%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEV---KERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q  I+Y+  +S K+ +++PFLE+L ++  EVLY+++ IDE A+  L+ ++ KK V  +KE L+L DE E    K  E K+ F  LC  IK+ LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINPD+ I+++L    +   +    K  V LLY+TAL++SGF+ D P     +I+ M+ + L         DE E+VE
Sbjct:  458 EGQKDIFYITGESKKAVENSPFLERLKKRGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDETEEEKKKREEKKKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLDEPNTFAARIHRMLKLGL-------SIDEDENVE 678          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.504e-45
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q + YY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K++F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANME++MKAQAL D S++ +M  ++ LEINPDHPI++ L    +   +    K  V LL++TAL+SSGF+ + P    N IY M+ + LG     +D DE  + E
Sbjct:  351 ETQKSTYYITGESKEQVANSAFVERVRKQGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKEKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNHIYHMIKLGLG-----TDEDEVAAEE 572          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.494e-45
Identity = 92/212 (43.40%), Postives = 138/212 (65.09%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  +Y++  +S     ++ F+E++  +  EV+Y+ EPIDE  IQ+L+ +  K+ V ++KE LEL ++D  K++  E K +F  LC  +   L +KV KV VS RL  SPC +V+ +FGWSANMER+MKAQAL DT+++ +M G++ LEINPDHPIV+ L        +    K  V LL++T+L+SSGF+ DSP    ++IY M+ + LG
Sbjct:  470 ENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKAKFESLCKLMNAILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLG 681          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.109e-44
Identity = 96/212 (45.28%), Postives = 138/212 (65.09%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG-DEDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  +Y++  +S     ++ F+E++  +  EV+Y+ EPIDE  IQ+L+ +  K+ V ++KE LEL  DE E K+RE  K +F  LC  +K  L  KV KV VS RL  SPC +V+ +FGWSANMER+MKAQAL DT+++ +M G++ LEINPDHPIV+ L        +    K  V LL++T+L+SSGF+ DSP    ++IY M+ + LG
Sbjct:  471 ENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFEGLCKLMKSILDSKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLG 682          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 1.449e-44
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.449e-44
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HSP82_TOBAC1.711e-4542.98Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP80_SOLLC1.711e-4544.08Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP85_TRYCR4.980e-4541.52Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROME4.980e-4544.81Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP81_ARATH4.980e-4542.98Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
H90B3_HUMAN6.504e-4540.97Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP83_DROAV8.494e-4543.40Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_DROPS1.109e-4445.28Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HS90A_PIG1.449e-4443.40Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR1.449e-4443.40Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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