FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_VIBHB (Chaperone protein htpG OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 65/211 (30.81%), Postives = 117/211 (55.45%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEV---KERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IY+L  DS  +AK++P LE+   K IEV+ + + IDE  +  L  F+ K+F  I+K  L+L   EDE    K++ET++EF  + +  +  LGD+V +V+ + +L+++P V+V+  F     M +L++A  QA+ +         + I EINP+H +VK +     +  D     R V++L   A+++   + + P+     I +++
Sbjct:  433 EGQDKIYFLTADSYAAAKNSPHLEQFRAKGIEVILMFDRIDEWLMNYLTEFDGKQFQSITKAGLDLSKFEDEAEKEKQKETEEEFKSVVERTQSYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKLLEAAGQAVPEV--------KYIFEINPEHALVKRM----ADEADEEVFGRWVEVLLGQAMLAERGSMEDPSQFVGAINKLL 631          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 60/164 (36.59%), Postives = 93/164 (56.71%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETK----QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLN 482
            E Q  IYY+  DS  +A ++P LE L +K IEVL + E IDE  I +L  + EK+   +++ +LELG+ ++  E+E +    +E   L + IK  LG KVA V+V+ RL+ +P  +V+G+   S  M +LM+A      +       +   E+NP HP+V  LN
Sbjct:  434 EGQTKIYYIVADSYDAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQMIKLMQA------AGQPVPEVKPTFEVNPAHPLVSRLN 591          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBM (Chaperone protein htpG OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 68/207 (32.85%), Postives = 106/207 (51.21%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSP-CVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY   +S +  +  P +E ++ K  EVLY  + IDE AI+ L  + EK+F  +S  DL + G+E E       +E   L + +K  L  KV  V+ SKRL + P C+   G+   S  ME+++ A       + + ++  ++LEIN +H + K L  A +   D    K   DLLY+ AL+  G T + P +  N I ++M
Sbjct:  428 EDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGIEGEEKENTSSSDDKENKELFESMKDILSGKVKDVRASKRLKNHPVCLANEGEL--SIEMEKVLNAM-----PNNQNIKADKVLEININHDVFKPLKEAYEG--DKEKLKLYTDLLYNQALLIEGLTINDPVEFTNNICKIM 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20
Identity = 59/212 (27.83%), Postives = 104/212 (49.06%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQ-----EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  IYY   ++  + +++P +E    K  EVL L +P+DEV ++ +  +  K    ++K  ++L  E+E    E ++     E+  L  W+   L D+V +V++S RL++SP  +V      +  +E++ +A         E  + +RILE+NP HP+V  L  A +        K   +LLY  AL++ G     P+     + E +A  L
Sbjct:  431 QTDIYYATGENRSTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYEGKTLRSVAKGQVDLDTEEERSAAEAERERQRTEYADLLTWLSSTLADQVREVRLSARLTTSPACVVGDAHDVTPTLEKMYRAM------GHEVPQVKRILELNPTHPLVSGLRKAREQGVTEESLKETAELLYGMALLAEGGELADPSHFTRILAERLARTL 636          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20
Identity = 65/199 (32.66%), Postives = 108/199 (54.27%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD----EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            E Q+ IYY+  DS  +A ++P LE   +K IEVL L + +DE  + +L+ F  K  V ++K  L+L D    E++ K+ E  + F  L + ++  LG++V +V+V+ RL  SP  +V G+   S ++ R++KA      +  E    + +LEINP+H ++    A  ++  D+ D      LL D AL++ G     PA
Sbjct:  430 EGQDKIYYVTADSYSAASNSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREFEGKSLVSVAKGGLDLADLADEEEKKKQTEVAESFKPLIERLQTALGEQVKEVRVTLRLVDSPACVVVGQNDLSPHLLRMLKA------AGQEVPEVKPVLEINPEHALI----ARIRDVSDA-DFGAWAQLLLDQALLAEGAQIADPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20
Identity = 66/208 (31.73%), Postives = 106/208 (50.96%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERE-TKQEFNLLCDWIKQQLGDKVAKVQVSKRLSS-SPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            E Q  IYY + DS    +  P  E + +K  E+LY  E IDE AI+ L  + EK+F  +S  DL + ++DE  + +    ++  L + +K+ L  KV  V+ SKRL + S C+   G+   +  ME+++ A         + ++  ++LEIN +H + K L  A  N  D    K    LLY+ AL+  G   + P +  N I ++MA
Sbjct:  428 EDQKYIYYASGDSYDRIEKLPQTELVSEKGYEILYFTEDIDEFAIKMLANYQEKEFKSVSSGDLGIENDDEQNQSDGDDSQYKDLFEEMKKTLDGKVKSVRASKRLKTHSVCLAADGEV--TIEMEKILNAM-----PDNQHVKADKVLEINTNHEVFKTLQNAFDN--DKDKFKLYTGLLYNQALLIEGLPIEDPVEFTNDICKVMA 626          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBJ (Chaperone protein htpG OS=Clostridium botulinum (strain Kyoto / Type A2) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.235e-19
Identity = 67/207 (32.37%), Postives = 105/207 (50.72%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSP-CVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY   +S +  +  P +E ++ K  EVLY  + IDE AI+ L  + EK+F  +S  DL + G+E E       +E   L + +K  L  KV  V+ SKRL + P C+   G+   S  ME+++ A       + + ++  ++LEIN +H + K L  A +   D    K   DLLY+ AL+  G   + P +  N I ++M
Sbjct:  428 EDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGIEGEEKENTSNSDDKENKELFESMKDILSGKVKDVRASKRLKNHPVCLANEGEL--SIEMEKVLNAM-----PNNQNIKADKVLEINMNHDVFKSLKEAYEG--DKEKLKLYTDLLYNQALLIEGLAINDPVEFTNNICKIM 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ENTS8 (Chaperone protein htpG OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19
Identity = 66/210 (31.43%), Postives = 107/210 (50.95%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V +V+++ RL+ +P ++ +     S  M +L  A  QA+ +         + I E+NPDH +VK       +  D    K  V+LL D AL +   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVAKADESLEKLADEVDESAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDNDEMSTQMAKLFAAAGQAVPEV--------KYIFELNPDHQLVK----RTADTQDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLL 622          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAI (Chaperone protein htpG OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=htpG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19
Identity = 65/197 (32.99%), Postives = 103/197 (52.28%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E+Q  IYY+  DS  SA ++P LE   + +I+VL L + IDE  +  L  F  KKF  ISKED+ L     E ++K ++   E       +K  LG++V  V+++ RL+ +PCVL+S     +  M +L  A A      L++     I EINPDH ++K +   C    +  +  + + LL D AL++     ++P
Sbjct:  425 EQQEKIYYITADSYSSANNSPHLELFKKNNIDVLLLSDRIDEWMMNYLSEFEGKKFQSISKEDISLNKLTKEKKIKNKDVSTEMIEFLKKVKNILGNQVKDVRLTHRLTETPCVLLSDSTEMTTQMAKLFSA-AGQSVPELKY-----IFEINPDHILIKKI---C-TINNENELHQWIKLLLDQALLAEKGNLENP 611          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.107e-19
Identity = 60/164 (36.59%), Postives = 94/164 (57.32%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETK----QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLN 482
            E Q  IYY+  DS ++A ++P LE L +K IEVL + E IDE  I +L  + EK+   +++ +LELG+ ++  E+E +    +E   L + IK  LG  VA V+V+ RL+ +P  +V+G+   S+ M +LM+A      +       +   EINP HP+V  LN
Sbjct:  434 EGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQA------AGQPVPEVKPTFEINPAHPLVSRLN 591          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_VIBHB7.241e-2030.81Chaperone protein htpG OS=Vibrio harveyi (strain A... [more]
HTPG_SHEPC7.241e-2036.59Chaperone protein htpG OS=Shewanella putrefaciens ... [more]
HTPG_CLOBM7.241e-2032.85Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_SALTO9.457e-2027.83Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_BORA19.457e-2032.66Chaperone protein htpG OS=Bordetella avium (strain... [more]
HTPG_BACLD9.457e-2031.73Chaperone protein htpG OS=Bacillus licheniformis (... [more]
HTPG_CLOBJ1.235e-1932.37Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_ENTS81.613e-1931.43Chaperone protein htpG OS=Enterobacter sakazakii (... [more]
HTPG_BUCAI1.613e-1932.99Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_SHESM2.107e-1936.59Chaperone protein htpG OS=Shewanella sp. (strain M... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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