FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BAUCH (Chaperone protein htpG OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=htpG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19
Identity = 62/208 (29.81%), Postives = 108/208 (51.92%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E+Q  IYY+  DS  +A S+P LE L +K IEVL L E ID   +  L  FN K F  +SK DL+L    +E+  ++++  + F    + +K+ LGD++ +V+++  L+ +P ++       + +M +L+ A              + I E+NP HPIVK ++    N  +       ++LL D AL+    T ++P     +I +++
Sbjct:  427 EQQEKIYYIIADSYAAANSSPHLELLQKKGIEVLLLHERIDAWMMNYLIEFNGKSFQLVSKADLKLDKFLNENTTEQKDMTKAFEPFIERVKKYLGDRIKEVRLTYSLTDTPAIVTIDSNNMTTHMAKLIVASGQNKPDI------KYIFELNPLHPIVKKVS----NTDNDIYFSEVIELLLDQALLVECGTLENPNQFVRRINKLL 624          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19
Identity = 65/207 (31.40%), Postives = 103/207 (49.76%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSP-CVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            E Q  IYY   +S    +  P  E +  K  E+LY  E +DE AI+ L ++ EK+F  +S  DL   D+++        E   L + +K  L  KV  V+ SKRL S P C+   G+   S  ME++++  A+ D  +++     ++LEIN +H +   L A+ ++  D  D      LLY+ AL+  G   + P    N I ++MA
Sbjct:  428 EDQPYIYYATGESYARIEKLPQTEMVADKGYEILYFTEDVDEFAIKMLASYKEKEFRSVSSGDLGFEDDEQKDTAADTDEQKELFEHMKTILDGKVKDVRASKRLKSHPVCLTAEGEV--SIEMEKVLR--AMPDNQNVQ---AEKVLEINVNHDVFDVLKASFESDKDKVDL--YTKLLYNQALLIEGLPVEDPVAFSNDICKVMA 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19
Identity = 63/199 (31.66%), Postives = 105/199 (52.76%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD----EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            E Q AIY+L  DS  +AK++P LE   +K IEVL L + IDE  + +L  F+ K    I+K DL+LGD    E E  ++  + EF    +  +   G++V KV ++ RL+ +P V+ +     +  M +L    A+G  +       +   E+NPDH +VK +     +  D T     ++LL++ AL++   + ++PA
Sbjct:  426 EGQKAIYFLTADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWVVGHLTEFDGKPLQSITKSDLDLGDLADKEQEESQKAQQAEFGSFLERAQSYFGERVKKVVLTHRLTDTPAVVSTDNDEMTTQMAKLF--AAMGQKAP----EVKYTFELNPDHRMVKKI----ADLTDETKFNDWIELLFEQALLAERGSLENPA 614          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRATN (Chaperone protein htpG OS=Francisella tularensis subsp. novicida (strain U112) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19
Identity = 69/202 (34.16%), Postives = 106/202 (52.48%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG-----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRG---RRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F+ K    I K D++L      +  E  E+ETK +F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+    G      FM G   + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 EGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKETK-DFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAGQG------FMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRATH (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain LVS) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19
Identity = 66/199 (33.17%), Postives = 106/199 (53.27%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETK-----QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F++K    I K D++L D+ E  E + K     ++F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+       S +  M  + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 ESQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDDKHMKSIIKGDIDL-DKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE---AGQSFMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRATF (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19
Identity = 66/199 (33.17%), Postives = 106/199 (53.27%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETK-----QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F++K    I K D++L D+ E  E + K     ++F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+       S +  M  + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 ESQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDDKHMKSIIKGDIDL-DKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE---AGQSFMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALTI (Chaperone protein htpG OS=Salmonella typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18
Identity = 63/208 (30.29%), Postives = 104/208 (50.00%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AK++P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V +V+++ RL+ +P ++ +     S  M +L  A      +       + I E+NPDH +VK       +  D    K  V+LL D AL +   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAA------AGQSVPEVKYIFELNPDHVLVK----RTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLL 622          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALPB (Chaperone protein htpG OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18
Identity = 63/208 (30.29%), Postives = 104/208 (50.00%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AK++P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V +V+++ RL+ +P ++ +     S  M +L  A      +       + I E+NPDH +VK       +  D    K  V+LL D AL +   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAA------AGQSVPEVKYIFELNPDHVLVK----RTADTEDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLL 622          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALPA (Chaperone protein htpG OS=Salmonella paratyphi A GN=htpG PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18
Identity = 63/208 (30.29%), Postives = 104/208 (50.00%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AK++P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V +V+++ RL+ +P ++ +     S  M +L  A      +       + I E+NPDH +VK       +  D    K  V+LL D AL +   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAA------AGQSVPEVKYIFELNPDHVLVK----RTADTEDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLL 622          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18
Identity = 57/212 (26.89%), Postives = 105/212 (49.53%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQ-----EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q+ IYY   ++  + +++P +E    K  EVL L +P+DEV ++ +  ++ K    ++K  ++L  ++E    E ++     E+  L  W+   L D+V +V++S RL++SP  +V      +  +E++ +A         E  + +RILE+NP HP+V  L  A +            +LLY  AL++ G     P+     + E +A  L
Sbjct:  431 QSEIYYATGENRTTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYDGKTLRSVAKGQVDLDTDEERSAAEAERERQRTEYADLLTWLGSALADQVREVRLSARLTTSPACVVGDAHDVTPTLEKMYRAM------GHEVPQVKRILELNPTHPLVSGLRKAREQGATEDSLTETAELLYGMALLAEGGELADPSRFTRILAERLARTL 636          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_BAUCH6.130e-1929.81Chaperone protein htpG OS=Baumannia cicadellinicol... [more]
HTPG_BACHD6.130e-1931.40Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_ACTP26.130e-1931.66Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_FRATN8.005e-1934.16Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATH8.005e-1933.17Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATF8.005e-1933.17Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_SALTI1.046e-1830.29Chaperone protein htpG OS=Salmonella typhi GN=htpG... [more]
HTPG_SALPB1.046e-1830.29Chaperone protein htpG OS=Salmonella paratyphi B (... [more]
HTPG_SALPA1.046e-1830.29Chaperone protein htpG OS=Salmonella paratyphi A G... [more]
HTPG_SALAI1.046e-1826.89Chaperone protein htpG OS=Salinispora arenicola (s... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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