FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ECO24 (Chaperone protein htpG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--EDLE-LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  +SK  E LE L DE +   +E ++      D +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NPDH +VK       +  D       V+LL D AL++   T + P
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA------AGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ANAPZ (Chaperone protein htpG OS=Anaplasma phagocytophilum (strain HZ) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 68/218 (31.19%), Postives = 106/218 (48.62%), Query Frame = 3 
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDE-----------VAIQNLQTFNEK---KFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            Q +I+YL+ D L+S K +P +EKLV   IEV+ L++P+D+           V  +++    EK   K +  S +  +   ED  +    K+      +++K+ L   V+ V+VSK+L++S   L          MER ++ Q       L + +G RILEIN DHPI K L    +   +S      V LLYD A I  G    S  D  ++I  ++A
Sbjct:  420 QESIFYLSGDDLESTKRSPQIEKLVSSGIEVILLVDPVDDFWTSVVSEYKGVPFKSVMRVGEKDLEKCIGASDDSGDKTSEDSGESASDKESIGSFIEYLKKVLDGVVSDVRVSKKLTTSLVCLAVPDNSMDIRMERFLREQ-----KQLNY-KGNRILEINIDHPIAKSLLKEHEARGESELLNGIVHLLYDEACIIEGEEIRSTVDFASRINGVLA 631
[Close]
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALTY (Chaperone protein htpG OS=Salmonella typhimurium GN=htpG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18
Identity = 63/208 (30.29%), Postives = 103/208 (49.52%), Query Frame = 3 
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AK++P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V  V+++ RL+ +P ++ +     S  M +L  A      +       + I E+NPDH +VK       +  D    K  V+LL D AL +   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAA------AGQSVPEVKYIFELNPDHVLVK----RTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLL 622
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_ECOLI1.366e-1833.50Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC1.366e-1833.50Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL61.366e-1833.50Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL51.366e-1833.50Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOK11.366e-1833.50Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS1.366e-1833.50Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]
HTPG_ECO571.366e-1833.50Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_ECO241.366e-1833.50Chaperone protein htpG OS=Escherichia coli O139:H2... [more]
HTPG_ANAPZ1.366e-1831.19Chaperone protein htpG OS=Anaplasma phagocytophilu... [more]
HTPG_SALTY1.783e-1830.29Chaperone protein htpG OS=Salmonella typhimurium G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
back to top