FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 61/208 (29.33%), Postives = 105/208 (50.48%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AK++P LE   +K IEVL L + IDE  +  L  F+ K F  +SK D    +L DE+  +++E  +      + +K  LG++V  V+++ RL+ +P ++ +     S  M +L  A      +  +    + I E+NP+H +VK       +  D T     V+LL D AL++   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKNSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVSKADDSLNKLADEERPEQQEADKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAA------AGQQAPEVKYIFELNPEHSLVK----RAADVADDTQFAEWVELLLDQALLAERGTLEDPNQFIRRMNQLL 622          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SALCH (Chaperone protein htpG OS=Salmonella choleraesuis GN=htpG PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 63/208 (30.29%), Postives = 103/208 (49.52%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED---LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYY+  DS  +AK++P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V  V+++ RL+ +P ++ +     S  M +L  A      +       + I E+NPDH +VK       +  D    K  V+LL D AL +   T + P     ++ +++
Sbjct:  425 EGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKVLEPFVERVKTLLGDRVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAA------AGQSVPEVKYIFELNPDHVLVK----RTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLL 622          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_KLEP7 (Chaperone protein htpG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 65/211 (30.81%), Postives = 106/211 (50.24%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDL---ELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            E Q  IYY+  DS  +AKS+P LE L +K IEVL L + IDE  +  L  F+ K F  ++K D    +L DE +   +E ++      + +K  LGD+V +V+++ RL+ +P ++ +     S  M +L  A  QA  +         + I E+NP H +VK       +  D       V+LL D AL++   T + P     ++ +++A
Sbjct:  425 EGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVAKADESLDKLADEVDESTKEAEKALEPFVERVKNLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQAAPEV--------KYIFELNPAHQLVK----RAADTQDDAQFGEWVELLLDQALLAERGTLEDPNQFIRRMNQLLA 623          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HAES1 (Chaperone protein htpG OS=Haemophilus somnus (strain 129Pt) GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 58/209 (27.75%), Postives = 112/209 (53.59%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            E Q AIYY+  DS  +AK++P LE   +KDIEVL L + IDE  +  L  F+ K+   I+K DL+LG   D+++ +++E  + F+   + +K  LG++V  V+++ RL+ +P V+ +     +  M +L  A      +       +   E+NP+H +VK +     +  D  +    ++LL + A+++   + ++P     ++  +++
Sbjct:  428 EGQKAIYYITADSYIAAKNSPHLELFNKKDIEVLLLSDRIDEWMLSYLTEFDGKQLQPITKADLDLGDLADKEQEEQKEQDKTFSSFIERVKTLLGERVKDVRLTHRLTDTPAVVSTDNDQMTTQMAKLFAA------AGQPVPEVKYTFELNPEHHLVKKV----ADLADEDEFANWIELLLEQAMLAERGSLENPTAFIKRVNSLLS 626          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRAP2 (Chaperone protein htpG OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETK-----QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRG---RRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F+ K    I K D++L D+ E  E + K     ++F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+    G      FM G   + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 EGQDTIYYITSDSYKAAVNNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDL-DKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAGQG------FMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CHLTE (Chaperone protein htpG OS=Chlorobium tepidum GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 69/211 (32.70%), Postives = 112/211 (53.08%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPD-STD--AKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            E Q  IYY +  S     + P LE   ++DIEVL L +P+D   I ++  +++K    I K ++++   +   ER + +    +    K+ LG++VA V  S+RL SSP  LVSGK    +  E++MK          +    ++ILEIN  HPI++  N A K+A   STD   + AV  L+++AL+  G   +S AD  +++ E++  A
Sbjct:  423 EGQTEIYYHSGSSRAQMLAHPNLEYFRKRDIEVLLLSDPVDVFVIPSIFEYDKKPLKSIEKAEIDMSTVEPEGERLSAEGTVGVISLFKEVLGERVADVVESRRLVSSPVTLVSGKDALDSQFEKMMKMM----NKDADMPSTKKILEINTAHPIIR--NLAGKHAVGLSTDPVVRAAVTQLFESALLLEG-DLESVADYVSRMNELVEAA 626          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BRAJA (Chaperone protein htpG OS=Bradyrhizobium japonicum GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 70/215 (32.56%), Postives = 100/215 (46.51%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGG 635
            Q  IYYL  DS++  KS P LE    + IEVL L +P+D         F  K    +S+ DL L         DE K+ E + +       IK  LG++V+ V+ S RL+SS   LV+   G S  +ER++  Q  G       MR + +LEIN  HP+V  +  A   +    D      LL + A I  G  P+ PA    ++  ++   LGG
Sbjct:  421 QTEIYYLVGDSIERLKSNPRLEAATARGIEVLLLSDPVDAFWTSMPTEFEGKPLKSLSQGDLNLDLIPRVDATDEAKKDEPEADEAATIAVIKAALGERVSDVKASTRLTSSASCLVADSQGPSRELERILSQQNRG-------MRAKPVLEINLRHPMVGAITKAQAGSKAVDDLSL---LLLEQAQILDGELPEDPAAFAARLNRLVLQGLGG 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18
Identity = 63/223 (28.25%), Postives = 113/223 (50.67%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDE-------------------VAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            Q  I+YL+ + L+SA  +P +E +V   IEV+ L++P+D+                   V   +L+ F E      +K+  E  D D+ +++E  + F    D++K+ LGD V+ ++VS++L++S   L   +      MER ++ Q       L + +G RILE+N  HP++  L    K+  +S   +  V +L+D A I  G   +S  D  N++ +++A
Sbjct:  420 QEHIFYLSGNDLESAMRSPQIEGMVSNGIEVVLLVDPVDDFWTSVVLEYKGVPFKSVTRVDESDLEKFTEGDDQQSTKKKKEKKDTDDAQQKENVEAF---IDYMKKVLGDSVSDIKVSRKLTTSLVCLAVPEHALDIRMERFLREQ-----KQLSY-KGSRILELNIKHPVLSGLLREYKDNGESELLENMVHVLFDQACIIEGEEVNSAVDFANRMNQVLA 633          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: TRAP1_HUMAN (Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens GN=TRAP1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 60/211 (28.44%), Postives = 108/211 (51.18%), Query Frame = 3
Query:   18 IYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKE-------DLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            IYYL   +   A+ +P+ E + +KD EVL+  E  DE+ + +L+ F++KK + +  +       + +  D     E  +++E   L  W++  LG +V  V+V+ RL + P ++   + G + +  R+   Q L  T        +  LEINP H ++K LN    + P    A+  VD +Y+ A+I++G   D  A +G ++ E++  AL
Sbjct:  497 IYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMGAARHFLRM---QQLAKTQEERAQLLQPTLEINPRHALIKKLNQLRASEPGL--AQLLVDQIYENAMIAAGLVDDPRAMVG-RLNELLVKAL 701          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 67/216 (31.02%), Postives = 102/216 (47.22%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IYYL  DS++  KS P LE    + IEVL L + +D         F  K    +S+ D+          D+ + K  ETK +   +   IK  LG++V+ V+ S+RL+SS   LV+G FG    +E+++     G  +       + +LEIN  HP+V  L  A  +  D+TD      LL + A I  G  P+ PA    ++  ++   L
Sbjct:  419 ENQTEIYYLVGDSIERLKSNPKLESATARGIEVLLLTDGVDAFWTSGQLDFGGKPLKSLSQGDVNFDLIPKLDADKPDDKPDETKADEATVIAVIKDALGERVSDVKASQRLTSSASCLVAGGFGPDRELEKMLARANKGAAT-------KPVLEINLGHPLVAALADAKADKADATDLS---FLLLEQAQILDGELPEDPAAFAGRLNRLVLRGL 624          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_YERE82.329e-1829.33Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_SALCH2.329e-1830.29Chaperone protein htpG OS=Salmonella choleraesuis ... [more]
HTPG_KLEP72.329e-1830.81Chaperone protein htpG OS=Klebsiella pneumoniae su... [more]
HTPG_HAES12.329e-1827.75Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_FRAP22.329e-1833.66Chaperone protein htpG OS=Francisella philomiragia... [more]
HTPG_CHLTE2.329e-1832.70Chaperone protein htpG OS=Chlorobium tepidum GN=ht... [more]
HTPG_BRAJA2.329e-1832.56Chaperone protein htpG OS=Bradyrhizobium japonicum... [more]
HTPG_ANAMM3.042e-1828.25Chaperone protein htpG OS=Anaplasma marginale (str... [more]
TRAP1_HUMAN3.973e-1828.44Heat shock protein 75 kDa, mitochondrial OS=Homo s... [more]
HTPG_RHOPS3.973e-1831.02Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
back to top