FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HAES2 (Chaperone protein htpG OS=Haemophilus somnus (strain 2336) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 58/208 (27.88%), Postives = 111/208 (53.37%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q AIYY+  DS  +AK++P LE   +KDIEVL L + IDE  +  L  F+ K+   I+K DL+LG   D+++ +++E  + F+   + +K  LG++V  V+++ RL+ +P V+ +     +  M +L  A      +       +   E+NP+H +VK +     +  D  +    ++LL + A+++   + ++P     ++  ++
Sbjct:  428 EGQKAIYYITADSYIAAKNSPHLELFNKKDIEVLLLSDRIDEWMLSYLTEFDGKQLQPITKADLDLGDLADKEQEEQKEQDKTFSSFIERVKTLLGERVKDVRLTHRLTDTPAVVSTDNDQMTTQMAKLFAA------AGQPVPEVKYTFELNPEHHLVKKV----ADFADEDEFANWIELLLEQAMLAERGSLENPTAFIKRVNNLL 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 66/199 (33.17%), Postives = 105/199 (52.76%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETK-----QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F+ K    I K D++L D+ E  E + K     ++F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+       S +  M  + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 EGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDL-DKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE---AGQSFMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 67/212 (31.60%), Postives = 107/212 (50.47%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEP-IDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSP-CVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            +Q AIYY+  ++ K  +++P LE   + DIEVL L +  IDE+    +  F E +F DI+  +    ++ E +++E +++F  +   IK +LGD V  V+V+ RLS SP CV+        A M  + +A  QA+ +++         ILEINP+H IVK LN       D    +    +L D A +S G           ++  + A AL
Sbjct:  437 EQKAIYYIVGENEKVLRNSPLLESYKKNDIEVLILDDKEIDEIITPAIGAFKEWEFKDITAIEPPKVEQSEEEKKEVEEKFQDILSKIKDKLGDAVKDVKVTSRLSESPSCVVKDAADAQMAAMAHMFRAMGQAMPESAP--------ILEINPEHEIVKKLNGCA----DEATIEDVSWILLDQAKLSEGMEITDTVAFAQRLSRITAKAL 636          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 60/212 (28.30%), Postives = 106/212 (50.00%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL----GDED----EVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            +Q  IYYL  +SL S K++P LE  V K +EVL  ++P+D+     +  + ++K   +++ D++L     +ED    E K  E K E  +L  +    LGD V  V++SK+L+ SP  L   +      MER ++ Q       L + R  ++LEIN  HP++K +  +   + ++   +  + LL+  A I  G   D  +    ++  ++
Sbjct:  426 EQEHIYYLTGNSLDSVKNSPQLEGFVSKGLEVLLFVDPVDDFWTSVIHEYKDQKIKSVTRADVDLEKFSSEEDKTDEENKSNEEKTEETIL-QYFTTVLGDSVKSVKISKKLTDSPVCLAVDEGAMDLRMERFLREQ-----KQLNY-RTPKVLEINTKHPLIKSIMKSYAESGENPTLEDMIHLLFYQACIVEGEEMDDVSLFAKRLNNLL 630          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPA (Chaperone protein htpG OS=Rhodopseudomonas palustris GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 67/212 (31.60%), Postives = 99/212 (46.70%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG-------DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYYL  DSL+  KS P LE    + IEVL L +P+D         F  K    +S+ D+          D+D+  + E K +   +   IK  LG++V+ V+ S+RL+SS   LV+G  G    +E+L+     G  S       + ILEIN  HP+V  L        D  +A     LL + A I  G  P+ PA   +++  ++
Sbjct:  419 ENQTEIYYLVGDSLERLKSNPKLESATARGIEVLLLTDPVDAFWTSGQLDFGGKPLKSLSQGDVNFDLIPKLEQDQDKDNKDEAKVDEATVIAVIKDALGERVSDVKASQRLTSSASCLVAGGMGPDRELEKLLARANKGAGS-------KPILEINLQHPLVAALG---DTKTDKAEAADLAFLLLEQAQILDGELPEDPAAFASRLNRLV 620          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MANSM (Chaperone protein htpG OS=Mannheimia succiniciproducens (strain MBEL55E) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 59/199 (29.65%), Postives = 104/199 (52.26%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERL--MKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q A+YY+  DS  +AK++P LE   +K IEVL L + IDE  +  L  F+ K    ++K DL+LG   D++E  ++E  ++F+     +K  LG++V  V+++ RL+ +P V+ +     +  M +L  M  Q + +         +   EINP H +VK          D T+    ++LL + A+++   + ++P
Sbjct:  427 EGQKAVYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSVTKADLDLGDLADKEEENQKEQDEKFDSFIQRVKSLLGERVKDVRITHRLTDTPAVVSTDNDQMTTQMAKLFAMSGQPVPEV--------KYTFEINPQHELVK----KAAKVTDETEFGDWIELLLNQAMLAERGSLENP 613          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRATT (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F+ K    I K D++L      E++ K  +  ++F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+       S +  M  + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 EGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE---AGQSFMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG----DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q+ IYY+ +DS K+A + P LE   +K IEV+ + + IDE  +  L  F+ K    I K D++L      E++ K  +  ++F  +   IK+ L DKV  V++SKRL+ SP  +V   +G S +M+++M+       S +  M  + ILE+N +H +V+ L    KN  D+       +LL   A+   G   + P
Sbjct:  426 EGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE---AGQSFMPGMGMKPILELNAEHNLVQKL----KNEADTEIFADLSELLLLQAMFVEGAKIEDP 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 64/217 (29.49%), Postives = 110/217 (50.69%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER------ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLM----KAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  IYY+   S  + ++ P++E   +KDIE++Y ++PID+  + +LQ F  KK V     D+ L D++E ++         K E   L  W+K++L D+V  V  S RL  +P ++V+     SA+MER++    K Q +           ++ LEIN  +P++K L    K   D+  A      + D A+I +G   D P  +  + Y+++  A+
Sbjct:  412 QEKIYYINGASRAAIEAGPYVEMFKKKDIEIVYTLDPIDDFVLSHLQEFEGKKLVSADGADISL-DKEEAEDALVDESGVDKAELAELLTWMKEELKDEVGDVLSSHRLVDAPAMIVNADGFMSASMERVLAASRKEQGIAGVDG-----SKKHLEINGKNPLIKQLAELRK--ADAGFAGEVAHQILDNAMIQAGLVVD-PLKMVARNYKILDRAV 619          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BUCBP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 62/208 (29.81%), Postives = 111/208 (53.37%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED--LELGDEDEVKERETKQE-FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            + Q  IY++  D+  SA S+P LE   +K+I+VL L + IDE  +  L  +NEKKF  +SK+D  +E    ++  + ET QE  N   +  K+ L DK+  ++ + +L+++P ++++     S  M +L    A G T        + ILEINP+H ++K +N    N  +    K  ++ L++  L++   T D+P     +I +++
Sbjct:  426 QNQEKIYFITADNYASAVSSPHLEFFKKKNIDVLILSDKIDEWMMNYLIEYNEKKFQSVSKDDKSIEKLVHEQNSQNETYQENMNDFLNRAKKTLSDKIKDIRFTHKLTNTPAMVITDSNEMSTQMAKLF--SAAGQTVPTI----KYILEINPNHLLIKKIN----NEKNEKKFKNWINFLFEQCLLAEKNTLDNPNKFIARINDLL 623          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_HAES23.973e-1827.88Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_FRATW3.973e-1833.17Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_ARCB43.973e-1831.60Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_WOLPM5.189e-1828.30Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_RHOPA5.189e-1831.60Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_MANSM5.189e-1829.65Chaperone protein htpG OS=Mannheimia succiniciprod... [more]
HTPG_FRATT5.189e-1832.32Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAT15.189e-1832.32Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_DESPS5.189e-1829.49Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_BUCBP5.189e-1829.81Chaperone protein htpG OS=Buchnera aphidicola subs... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
back to top