FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 1.449e-44
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 179.489 bits (454), Expect = 1.449e-44
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  486 ENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 697          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.449e-44
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  476 ENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 687          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 1.449e-44
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 1.892e-44
Identity = 91/212 (42.92%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  +YY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  482 ENQKHVYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 693          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.471e-44
Identity = 94/213 (44.13%), Postives = 141/213 (66.20%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDED--EVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IYY+  +S K+ +++PFLE+L +K  EVL++++ IDE A+  L+ ++ KK V  +KE L+L DED  E K+R  E K+ F  LC  IK  LGD+V KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINPD+ I+++L    +   +    K  V LL++TAL++SGF+ D P     +I+ M+ + L
Sbjct:  472 EGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDEDDEEAKKRREERKKRFEELCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGL 684          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.471e-44
Identity = 89/226 (39.38%), Postives = 136/226 (60.18%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLG-DKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            + Q  I+Y+   S +  + +PFLE+L++K  EV++  +P+DE  +Q L  + +KKF ++SKE L++G +   K++E K+ F  L  W K  L  + V  V++S RL+ +PCV+V+ KFGWSANMER+M++Q L D +   +MRG+R+LEINP HPI+K+L     + P+    K    L+Y TALI SGF    P D   +IY  +   L         +E E+ E
Sbjct:  563 KSQKDIFYITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDS--KDKELKEAFKELTKWWKGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNISPDAVADEEIEAAE 786          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.215e-44
Identity = 91/212 (42.92%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IY++  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 177.948 bits (450), Expect = 4.215e-44
Identity = 91/212 (42.92%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IY++  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.215e-44
Identity = 90/212 (42.45%), Postives = 137/212 (64.62%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            + Q  IYY+  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ ++ K  V ++KE LEL +++E K++  E K ++  LC  +K  L  K+ KV VS RL SSPC +V+  +GW+ANMER+MK+QAL D S++ +M  ++ LEINP HPIV+ L    +   +    K  V LL++TAL+SSGFT D P    N+IY M+ + LG
Sbjct:  479 DTQKHIYYITGETKDQVANSAFVERLRKAGLEVIYMIEPIDEYCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDILDKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLG 690          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HS90A_MACFA1.449e-4443.40Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.449e-4443.40Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE1.449e-4443.40Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN1.449e-4443.40Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_CHICK1.892e-4442.92Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HSP82_MAIZE2.471e-4444.13Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
ENPL_ARATH2.471e-4439.38Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HS90A_RAT4.215e-4442.92Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE4.215e-4442.92Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
H90A1_DANRE4.215e-4442.45Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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