FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METRJ (Chaperone protein htpG OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18
Identity = 68/209 (32.54%), Postives = 101/209 (48.33%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            Q AIYYL  D  ++ KS+P LE    + +EVL L + +D      L TF+ K    I+K  L+L     E ++ E  +  +     +K  LG +V+ V+ + RL  S  VL +G  G    M+RLM+              G+ +LEINP HP+++ L A    AP+S +  +A   L D A I  G +P  PA     +   +A A G
Sbjct:  413 QEAIYYLVADDAEALKSSPQLEGFRARGLEVLLLSDHVDAFWPDQLGTFDGKPLRSITKGGLDLSKFALEGEQPEAPEGIDAFVAAVKTALGAEVSDVRTTDRLVDSAVVLSAGSGGPDLQMQRLMRRAGRAGA-------GQPVLEINPRHPLIRALAA----APES-EVPQAAGTLLDLARIQDGDSPRDPAAFARTVAAALAAARG 609          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIN (Chaperone protein htpG OS=Haemophilus influenzae GN=htpG PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18
Identity = 63/209 (30.14%), Postives = 111/209 (53.11%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q AIYY+  DS  +AK++P LE   +K IEVL L + IDE  +  L  F+ K+   I+K DL+LGD  + KE ET+++    F    + +K  LG++V  V+++  L+ +P V+ +     +  M +L  A      +       +   E+NP+H +VK +     +  D T+    V+LL + A+++   + ++PA    +I +++
Sbjct:  428 EGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLAD-KESETQKQQDEAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAA------AGQPVPEVKYTFELNPEHHLVKKV----ADIADETEFADWVELLLEQAMLAERGSLENPAAFIKRINKLL 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIE (Chaperone protein htpG OS=Haemophilus influenzae (strain PittEE) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18
Identity = 63/209 (30.14%), Postives = 111/209 (53.11%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q AIYY+  DS  +AK++P LE   +K IEVL L + IDE  +  L  F+ K+   I+K DL+LGD  + KE ET+++    F    + +K  LG++V  V+++  L+ +P V+ +     +  M +L  A      +       +   E+NP+H +VK +     +  D T+    V+LL + A+++   + ++PA    +I +++
Sbjct:  428 EGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLAD-KESETQKQQDEAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAA------AGQPVPEVKYTFELNPEHHLVKKV----ADIADETEFADWVELLLEQAMLAERGSLENPAAFIKRINKLL 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_VEREI (Chaperone protein htpG OS=Verminephrobacter eiseniae (strain EF01-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQE-FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            E Q AIYY+  D+L +AK +P LE   +K IEVL + + +DE A+  L  F+      ++K  ++LG   DE E K  E   E F  L   +K+ L DK   V+V+ RL  SP  LV    G S  + RL+K       +  +    + +LE+N  H +V+ L+        S        +L+D AL++ G  P  PA
Sbjct:  466 EGQEAIYYITADTLAAAKHSPQLEVFKKKGIEVLLMTDRVDEWALNYLHEFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPLLARLKETLKDKAEDVRVTTRLVDSPACLVVHGDGMSTQLARLLK------QAGQQAPETKPVLEVNASHALVRKLDG-------SQHFDDLAHILFDQALLAEGGLPADPA 651          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HAEI8 (Chaperone protein htpG OS=Haemophilus influenzae (strain 86-028NP) GN=htpG PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 63/209 (30.14%), Postives = 111/209 (53.11%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q AIYY+  DS  +AK++P LE   +K IEVL L + IDE  +  L  F+ K+   I+K DL+LGD  + KE ET+++    F    + +K  LG++V  V+++  L+ +P V+ +     +  M +L  A      +       +   E+NP+H +VK +     +  D T+    V+LL + A+++   + ++PA    +I +++
Sbjct:  428 EGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLAD-KESETQKQQDKAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAA------AGQPVPEVKYTFELNPEHYLVKKV----ADIADETEFADWVELLLEQAMLAERGSLENPAAFIKRINKLL 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: TRAP1_DICDI (TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 54/195 (27.69%), Postives = 99/195 (50.77%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLE---LGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDS 581
            +Q  IY+L+  +     S+P+ E    KDIEV++L   +DE  + N+  F +KK V +  ++ E     ++D+  E  ++ E +    W+     DKV + + + R  SSP +++  +   SAN  R++K    G     +    ++++E N +HPI+  L    ++ P  T AK  +D + D A +S+G   D+
Sbjct:  509 EQKNIYFLSVPNRAVGLSSPYYEPFQLKDIEVIFLYNAVDEFVLTNVGHFGDKKIVSVESKEAEEFLATNQDKKTETLSQDEIDKFLSWVSTVASDKVTQAKSTTRSISSPAIIIDHE---SANFRRMLKMVEPGK----QHETPKQVVEFNMNHPIILKLVQQTESNP--TIAKLVIDQVVDNAFVSAGLIEDN 694          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCR (Chaperone protein htpG OS=Ehrlichia chaffeensis (strain Arkansas) GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 68/216 (31.48%), Postives = 108/216 (50.00%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEK---KFVDISKEDLE----LGDEDEVKERE-----TKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            Q+ IYYL  + L S K +P LE  + + IEV+ L++P+D+    N+ T  +K   K V  + EDLE    L   +E+KE E     +K++ +    +  Q L   V+ V+VSK+L++SP  L          MER ++ Q       L + +  +ILEINP HPIV  +     NA +S   +  + LL + A I  G      +D   ++  ++A
Sbjct:  425 QDNIYYLTGNDLDSVKKSPQLEGFISRGIEVILLVDPVDDF-WTNVVTDYQKVPLKSVIRADEDLEKLAHLDKSEEIKENEDESVDSKEKVDTFVKYAAQVLDKLVSSVRVSKKLTNSPVCLAVADGSMDIRMERFLREQ-----KQLNY-KSTKILEINPKHPIVTKMIDEHANAGESVTLENMLHLLLNQACILEGEELQDVSDFAERMNNILA 633          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_AZOC5 (Chaperone protein htpG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 71/217 (32.72%), Postives = 102/217 (47.00%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKF-------VDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLM-KAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q AIYY+  D L   + AP LE    + +EVL L + +D   +     +  K F        D+S   L   DE E  E E K   + +  ++K+ LGD+VA V+ S RL++S   LV+ + G    +E+L+  A  LGD +       + +LEINP HP+V  L  A   A DS     A  LL D A +  G  P  P     ++  +M   L
Sbjct:  427 ENQTAIYYITGD-LARVEHAPQLEGFRARGVEVLLLPDQVDSFWVTAGVDYEGKPFKSVTQGAADLSLIPLPKSDEAETPEPEAKDTGDFIA-FVKETLGDQVADVRASDRLTTSAVCLVAPESGIDRRLEKLLASAGRLGDAA-------KPVLEINPRHPLVAAL--AAHGASDSNFRADAAHLLLDQARVLDGDQPSDPQAFAERLMRVMQRGL 632          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ACTSZ (Chaperone protein htpG OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 63/212 (29.72%), Postives = 107/212 (50.47%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD----EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERL--MKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            E Q A+YY+  DS  +AK++P LE   +K IEVL L + IDE  +  L  F+ K    I+K DL+LGD     +  KE+   +  +   + +K  LG++V  V+++ RL+ +P V+ +     +  M +L  M  Q + +         +   E+NPDH +VK   A      D +     V+LL + A++S   T ++P     ++  ++A
Sbjct:  428 EGQKAVYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSITKADLDLGDLADKTEAEKEKAQDEALSGFIERVKTLLGERVKDVRLTHRLTDTPAVVSTDNDQMTTQMAKLFAMSGQPVPEV--------KYTFELNPDHALVKKTAA----LTDESAFADWVELLLEQAMLSERGTLENPTAFIKRVNTLLA 627          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: TRAP1_MOUSE (Heat shock protein 75 kDa, mitochondrial OS=Mus musculus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 57/200 (28.50%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   18 IYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKE-------DLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLG 596
            IYYL   +   A+ +P+ E + QK  EVL+  E  DE+ + +L+ F++KK + +  +       + +  D     ER +++E   L  W++  LG +V  V+V+ RL + P ++   + G + +  R+   Q L  T        +  LEINP H ++K L    ++ P+   A+  VD +Y+ A+I++G   D  A +G
Sbjct:  499 IYYLCAPNRHLAEHSPYYEAMKQKHTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPADERLSEKETEDLMAWMRNALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRM---QQLAKTQEERAQLLQPTLEINPRHTLIKKLCQLRESEPEL--AQLLVDQIYENAMIAAGLVDDPRAMVG 693          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_METRJ6.777e-1832.54Chaperone protein htpG OS=Methylobacterium radioto... [more]
HTPG_HAEIN6.777e-1830.14Chaperone protein htpG OS=Haemophilus influenzae G... [more]
HTPG_HAEIE6.777e-1830.14Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_VEREI8.851e-1833.17Chaperone protein htpG OS=Verminephrobacter eiseni... [more]
HTPG_HAEI88.851e-1830.14Chaperone protein htpG OS=Haemophilus influenzae (... [more]
TRAP1_DICDI1.972e-1727.69TNF receptor-associated protein 1 homolog, mitocho... [more]
HTPG_EHRCR1.972e-1731.48Chaperone protein htpG OS=Ehrlichia chaffeensis (s... [more]
HTPG_AZOC51.972e-1732.72Chaperone protein htpG OS=Azorhizobium caulinodans... [more]
HTPG_ACTSZ2.575e-1729.72Chaperone protein htpG OS=Actinobacillus succinoge... [more]
TRAP1_MOUSE3.363e-1728.50Heat shock protein 75 kDa, mitochondrial OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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