FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16
Identity = 64/212 (30.19%), Postives = 96/212 (45.28%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IYYL  DSL   K+ P LE    + IEVL L + +D         F  K    +S+ ++          D+ E K  E K +   +   IK  LGD+V+ V+ S+RL++S   LV+G FG    +E+++     G  +       + +LEIN  HP+V    A      D  DA     LL + A I  G  P+ PA    ++  ++
Sbjct:  419 ENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQGEVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKMLARANKGAAT-------KPVLEINLGHPLVA---ALADTKADKADATDLSFLLLEQAQILDGELPEDPAAFAGRLNRLV 620          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16
Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLE--LGDEDEVKERE----TKQE---FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRW 641
            E Q  I+Y+A    ++A+  P +E   +K +EVLYL+EPIDE  ++ L ++++  F  +   D E     ED    R+    T+ E   F  L + +K  LGD V  V++S RL+ SP  LV      +++M+RL++     ++        R++ E+N DHPI+++L     +       +     L+ T+L+  G+  D P +L   ++ +M  +  G W
Sbjct:  418 EGQKEIWYIAAPGREAARLDPRVEVFRRKGLEVLYLLEPIDEFVLETLDSYSDFSFKAVEHADGEKLAQFEDTGPARDVTPLTEDEDAAFARLIERMKALLGDAVEDVRISHRLADSPACLVQPGGASTSSMDRLLRVLHKDESVP------RKVFEVNRDHPILRNLLKVFTSDASDPLVEDTTRQLFATSLMLDGYLKD-PHELAAMMHRLMEKS--GDW 630          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 59/215 (27.44%), Postives = 110/215 (51.16%), Query Frame = 3
Query:   18 IYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDI---------SKEDLELGDE--DEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            IYYL   +   A+ +P+ E + +K+ EVL+  E  DE+ + +L+ F++KK + +          +E  E G    D + E+ET+     L  W++  LG ++  V+V+ RL + P ++   + G + +  R+   + L  T        +  LEINP H ++K L+    + PD   A+  VD +Y+ A+I++G   D P  +  ++ +++  AL
Sbjct:  496 IYYLCAPNRHLAEHSPYYEAMKRKNTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDGAPAGDCLSEKETED----LMAWMRNALGSRITDVKVTLRLDTHPAMITVLEMGAARHFLRM---RQLAKTQEERAQLLQPTLEINPRHVLIKKLSQLRDSEPDL--AQLLVDQIYENAMITAGLI-DDPRPMVGRLNQLLVKAL 700          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICCK (Chaperone protein htpG OS=Rickettsia canadensis (strain McKiel) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16
Identity = 58/199 (29.15%), Postives = 101/199 (50.75%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++       +E     +++  E+ LL D+ K+ LGD V  V++SK+L+SSP  L   +      MER L++ + + + S+       + LE+NP + I++    DL A  KN       K  V+L++D A I  G
Sbjct:  414 EGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSSSEEKNTDSKKSDDEYKLLTDYFKETLGDLVKDVKISKKLTSSPACLAVSESAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NKELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METPP (Chaperone protein htpG OS=Methylibium petroleiphilum (strain PM1) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.284e-16
Identity = 62/207 (29.95%), Postives = 102/207 (49.28%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQE-FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            Q AIYY+  D+  +A+ +P LE   +K IEVL L + +DE  + +L  F  K    ++K  ++LG   DE E ++ E   E F  + + +K  L ++   V+V+ RL  SP  LV      S ++ RL+K       +SL       ILE+N +H +VK L+        S        +L+D A+++ G   D PA    ++  ++
Sbjct:  431 QEAIYYITADTTAAARHSPQLEVFRKKGIEVLLLTDRVDEWMLSHLFEFEGKPLQSVAKGAVDLGKLQDEGEKQQAEAAAEAFKPVLEKLKDTLKERAKDVRVTTRLVDSPACLVVEDGDISGHLARLLKQAGQSAPTSLP------ILEVNTEHALVKRLDG-------SERFDDLAQVLFDQAVLAEGGQLDDPAAYVQRVNRLL 624          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BUCCC (Chaperone protein htpG OS=Buchnera aphidicola subsp. Cinara cedri GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.413e-15
Identity = 57/196 (29.08%), Postives = 102/196 (52.04%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            + Q  IY++ +DS KSA ++P LE   + DI+VL L E IDE  +  L  FN  KF  +SK D +  D   +K+     K  FN   +  K+ L +KV  V+++ RL ++P ++++     S  M ++  A      +     + + ILEINP HP++K +    +   +  D    + +++D +++S   + ++P
Sbjct:  427 KNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNIKFQSVSKLD-DTIDSLLLKKNVSNEKNTFNEFIEKTKKILKNKVKDVKITYRLKNTPAIVLTDTNDMSTQMAKIFSA------AGQPIPKIKYILEINPLHPLIKKI----EKIKNEKDFSNWIKIIFDQSILSEKGSLENP 611          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ORITB (Chaperone protein htpG OS=Orientia tsutsugamushi (strain Boryong) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 62/215 (28.84%), Postives = 103/215 (47.91%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG--DEDEVKERETK------------QEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKI 605
            +Q  IYY+  D L++ KS+P +E L+ ++I+VL L + +D+  +   + +N+     ++  ++E+   D    K  +T             Q    L  + K+ LGDKV  V+VSK+L+ SP  L   +       ER L++ + L   SS       +ILEINP+H I+K +N   K   +    K+ V  L D + +  G       D  N+I
Sbjct:  414 EQKNIYYITGDDLEALKSSPQIEGLLSRNIDVLLLTDDVDKFWVMVTRKYNDYVLKSVTSANIEIDNCDTKTAKSSDTNNDGKDDTSSSDDQNCEQLIKYFKEVLGDKVKSVEVSKKLTRSPVCLTVPEGSMDIRTERFLIEQKQLSSHSS-------KILEINPNHTIIKKINENIKLNQNLDVNKQLVMTLLDQSYLIEGQPIPDLQDYCNRI 621          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 56/199 (28.14%), Postives = 102/199 (51.26%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E Q+ IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     + E      ++ D+++       +E     +++  E+ LL D+ K+ LG+ V +V++SK+L+SSP  L          MER L++ + + + S+       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  416 EGQSTIYYLSGDNPDKLLSSPQIEGLLSKEIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 601          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHILO (Chaperone protein htpG OS=Rhizobium loti GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 67/201 (33.33%), Postives = 96/201 (47.76%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERET--KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPAD 590
            E Q AI+++A D     +++P LE    + IEVL L +P+D   +     F+ K F  +++   EL D    D+ K+ +T    E +    ++K  LGD V+ V+ S RL+ S   LV+ + G     ERLM A    D ++      + ILEINP H  V  L  A     D      A  LLYD A +  G   D PAD
Sbjct:  420 EGQKAIFFMAGDDRARLEASPQLEGFKARGIEVLLLTDPVDSFWVTMAPDFDGKPFKSVTQGVAELSDIPLLDDAKKPDTAAAPEVDGFLAFVKSALGDAVSDVKASDRLTESAVCLVAPEHGPDRQFERLMNAAGRLDKAA------KPILEINPRHERV--LALAGLGDEDQAFKDDAAHLLYDEARVLDG---DKPAD 609          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 58/206 (28.16%), Postives = 98/206 (47.57%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSP-CVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E+Q  IYY + +S       P  E +  K  ++LY  E IDE AIQ L  ++ K+F  ++  DL +   ++ +  ET+ E   +   +++ L   V +V+ S RL S P C    G    S  ME+++KA       + + +   +ILE+N  H + + +  A   A D    +R   L+Y  AL+  G   + P    N++  +M
Sbjct:  427 EEQKYIYYASGESTDRLDKLPQSELVKDKGFDILYFTEEIDEFAIQMLLNYDGKEFKSVTSSDLGIEQTEQAETTETQAE---MFKAMQEVLAGHVKEVKASTRLKSHPVCFATDGAV--SIEMEKILKAM-----PNNQDVAAVKILELNTSHDVFRAIETA--YAEDRPKFERYTKLMYQQALLMEGLPIEDPVAFANEVCALM 620          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_RHOP22.847e-1630.19Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_DESVH2.847e-1628.83Chaperone protein htpG OS=Desulfovibrio vulgaris (... [more]
TRAP1_BOVIN4.857e-1627.44Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
HTPG_RICCK6.343e-1629.15Chaperone protein htpG OS=Rickettsia canadensis (s... [more]
HTPG_METPP8.284e-1629.95Chaperone protein htpG OS=Methylibium petroleiphil... [more]
HTPG_BUCCC1.413e-1529.08Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_ORITB1.846e-1528.84Chaperone protein htpG OS=Orientia tsutsugamushi (... [more]
HTPG_RICM52.410e-1528.14Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_RHILO3.148e-1533.33Chaperone protein htpG OS=Rhizobium loti GN=htpG P... [more]
HTPG_EXIS23.148e-1528.16Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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