FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15
Identity = 57/193 (29.53%), Postives = 90/193 (46.63%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVK-ERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDS 581
            +Q  IYY + ++     + P +E   +  IEVL L +P+D   I ++  F++K    I K D +   +   K E       N +    K+ L ++V  V  S+RL SSP  LVSGK    + +ER+MK        +      +RILE+N  HPIV+++        ++   K     LY+ AL   G   D+
Sbjct:  425 EQKEIYYHSGNNRAQLLAHPNIEYFREHGIEVLLLSDPVDMFVIPSIHEFDKKPLKSIEKADCDFSQQSSNKAEPVAPNLLNPVLQAFKEALSNEVEDVVESRRLVSSPVTLVSGKDAIDSQLERMMKMM------NTPMPPAKRILEVNSSHPIVRNIAGMIMADANNPLIKTVARQLYEGALFLEGSLEDA 611          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NEOSM (Chaperone protein htpG OS=Neorickettsia sennetsu (strain Miyayama) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 58/212 (27.36%), Postives = 102/212 (48.11%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE--RETKQ----EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAM 623
            +Q  IY L + S +SAK++P LE  V + ++VL+  +P+D+  I     +       I++  ++L    E+++  +E +Q    E + L   +++ L D+V  V++SKRL+ SP  L          ME+ M  Q           R ++ILEIN  HP++  +        DS + +  + LLYD A I  G    +P  +   +  ++ M
Sbjct:  418 EQKEIYCLCSTSFESAKNSPQLEGFVSRGLDVLFFTDPVDDFWISVSHEYKSYNIKSITRSSIDLDAFAELEKAGQEVQQHHDKEIDRLIAKMQEVLKDEVESVRISKRLTESPVCLAVPDGAMDIRMEKFMLEQ------KQLHSRSKKILEINASHPVIGKIIGKV----DSPEVEDLIFLLYDQACILQGDEVRNPVRMSKALTRLLLM 619          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 58/199 (29.15%), Postives = 103/199 (51.76%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQ---EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E Q+ IYYL+ D+     S+P +E L+ K I+VL   + +D+  +     + E      ++ D+++     + E K  ++K+   E+ LL D+ K+ LG+ V +V++SK+L+SSP  L          MER L++ + + + S+       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  414 EGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 58/199 (29.15%), Postives = 103/199 (51.76%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQ---EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E Q+ IYYL+ D+     S+P +E L+ K I+VL   + +D+  +     + E      ++ D+++     + E K  ++K+   E+ LL D+ K+ LG+ V +V++SK+L+SSP  L          MER L++ + + + S+       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  414 EGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHORT (Chaperone protein htpG OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 64/220 (29.09%), Postives = 100/220 (45.45%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-----------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q+A+YY+  D   +   +P +E  V + +EVL L +PIDE  +  +    +     +++   +L            D+ E    ET  + + L   +K  LG  VA V+VS RL+ SP  LV+ +   S ++++L++    G   S     G R+LEINP H +VK L    + A        A  LL D A I  G  P        ++ E+M   L
Sbjct:  415 EGQSALYYITGDDATALARSPQVEGFVARGVEVLLLTDPIDEFWVSAVPKVGDTALKAVAQGSADLERLALIDGKQPPDDAEHAPAET-AKMDALIAAMKAALGTAVADVRVSARLTDSPVCLVAKEGAMSLHLQKLLRQANQGSELS-----GDRVLEINPRHALVKTL---AERAATGGSVDEAALLLMDQARILEGEAPADAIAFARRLTEVMGKGL 625          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 56/198 (28.28%), Postives = 97/198 (48.99%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++       +E     +++  E+ LL D+ K+ LG+ V +V++SK+L+SSP  L          MER +  Q     +S       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  414 EGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEEKNADSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIAAAS------AKNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICCN (Chaperone protein htpG OS=Rickettsia conorii GN=htpG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 56/199 (28.14%), Postives = 100/199 (50.25%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E Q+ IYYL+ D+     S+P +E L+ K I+VL   + +D+  +     + E      ++ D+++       +E      ++  E+ LL D+ K+ LG+ V +V++SK+L+SSP  L          MER L++ + + + S+       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  414 EGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSTKSNDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICAH (Chaperone protein htpG OS=Rickettsia akari (strain Hartford) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14
Identity = 55/198 (27.78%), Postives = 97/198 (48.99%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E+QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++       ++     +++  E+ LL D+ K+ LG  V +V++SK+L+SSP  L          MER +  Q     +S       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  414 EEQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEDKNTHSKKSDDEYKLLTDYFKETLGKLVKEVKISKKLTSSPACLAVSDSAMDIRMERFLIEQKQITAAS------AKNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRW (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Welgevonden) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14
Identity = 60/218 (27.52%), Postives = 106/218 (48.62%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDE-----------VAIQNLQTFNE--KKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            +QN IYYL  + L S K +P LE  V + IEVL L++P+D+           V ++++   +E  +KF D+ K+D     E + ++ ++K++ +    +  Q L + V+ V+VSK+L+ SP  L          MER ++ Q       L + +  +ILEIN  HPIV  +        ++      + LL   A I  G    + +D   ++  +++
Sbjct:  425 EQNNIYYLTGNDLDSIKKSPQLEGFVSRGIEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKDD--ESKESQNEDAQSKEKVDKFISYAAQVLTNLVSNVRVSKKLTDSPVCLAVADGSMDIRMERFLREQ-----KQLNY-KSTKILEINSKHPIVSKMIDQYAENGENAVLCNMLHLLLGQACILEGEELQNVSDFAERMNNVLS 634          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 60/207 (28.99%), Postives = 98/207 (47.34%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD----EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMK--AQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKI 605
            E Q+AIYYLA  SL   K++P LE    + IEVL L + +D   + N   F  K F  I++   +L      +++    +          + +++L  +VA V+ S RL+ S   LV+ + G+   ME++++   +  G T        + ILEIN  HP++K + A      D++  + A  LL D A I  G  P  P     ++
Sbjct:  423 EGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKSITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVAPEDGYDRQMEKILQNAGRLQGAT--------KPILEINLAHPVIKAIAAV---EDDASYQEDATFLLLDQARILDGERPQDPRKFAQRL 618          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_CHLCH4.111e-1529.53Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_NEOSM5.370e-1527.36Chaperone protein htpG OS=Neorickettsia sennetsu (... [more]
HTPG_RICRS7.013e-1529.15Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO7.013e-1529.15Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RHORT7.013e-1529.09Chaperone protein htpG OS=Rhodospirillum rubrum (s... [more]
HTPG_RICFE9.159e-1528.28Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]
HTPG_RICCN9.159e-1528.14Chaperone protein htpG OS=Rickettsia conorii GN=ht... [more]
HTPG_RICAH1.562e-1427.78Chaperone protein htpG OS=Rickettsia akari (strain... [more]
HTPG_EHRRW1.562e-1427.52Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_RHIEC2.041e-1428.99Chaperone protein htpG OS=Rhizobium etli (strain C... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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