FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRG (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Gardel) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 59/218 (27.06%), Postives = 105/218 (48.17%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDE-----------VAIQNLQTFNE--KKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            +QN IYYL  + L S K +P LE  V + +EVL L++P+D+           V ++++   +E  +KF D+ K D     ++E  + ++K++ +    +  Q L + V+ V+VSK+L+ SP  L          MER ++ Q       L + +  +ILEIN  HPI+  +        +S      + LL   A I  G    + +D   ++  +++
Sbjct:  425 EQNNIYYLTGNDLDSIKKSPQLEGFVSRGVEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKGDESKDSQNE--DTQSKEKVDKFIGYAAQVLNNLVSNVRVSKKLTDSPVCLAVADGSMDIRMERFLREQ-----KQLNY-KSTKILEINSKHPIISKMIDQYTENGESAMLCNMLHLLLGQACILEGEELQNVSDFAERMNSVLS 634          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 42/119 (35.29%), Postives = 72/119 (60.50%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE--RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKF 353
            E Q +I  +  +  +   ++ F+E+  +K  EV+Y+ EPIDE  +Q L+ F+ K  + ++KE LEL +++E K+   E+  +F  LC  +K+ L  KV +V +S RL SSPC +V+  +
Sbjct:  386 EAQKSICDIIGECKEQVANSAFVEQEWKKGFEVIYMSEPIDEYCVQQLKEFDGKSLLSVTKEGLELPEDEEEKKIMEESNVKFENLCRLMKEILDKKVERVTISSRLVSSPCRIVTSTY 504          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SULDN (Chaperone protein htpG OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.665e-14
Identity = 62/211 (29.38%), Postives = 98/211 (46.45%), Query Frame = 3
Query:    3 EKQNAIYYLA-TDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQA-LGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E +  IYY+    SL   KS+P LE+   + I VL L E ID +    +  + E K + ++    E  + D+  + ++ +EF  L   +K+ LGD V  V+V+  L  SP  L   K   +  M ++MK     GDT +        IL+INP H ++  L    KN+ D      A  LL D A +  G   +  A    ++  ++A A+
Sbjct:  429 ETKKEIYYITGKTSLSMLKSSPALERFKSRGINVLVLNEEIDTIIFPMVTEYKEYKLIHVNDVKFEENENDKKAQEKSSKEFEGLTKELKESLGDSVKSVEVTFDLVDSPVKLKEDKEDPAFMMAQIMKQMGQSGDTPA-----PAPILQINPKHELIIKL----KNSADINLINDAAHLLLDQAKLFDGVQLEDTAGFVLRLNRVIAKAI 630          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.665e-14
Identity = 61/214 (28.50%), Postives = 100/214 (46.73%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-----GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q+AIYYL  D+L   K++P LE    + IEVL L  P+D   +     F+ K F  I++   +L      D+      E          + ++ LG+ V+ V+ S RL+ S   LV+ + G    ++++++     D   +E    + +LEINP H ++  L A C  + D    + AV LL D A +  G  P+ P     ++  +   AL
Sbjct:  422 EGQSAIYYLTGDNLAQLKASPQLEGFRARGIEVLLLTCPVDSFWVTTAPDFDGKPFKSITQGAADLAGIAKNDDAAAASPEAGAAVTDFVSFARETLGEAVSDVRTSDRLTESAVCLVAPEQGPDRQLQKMLQ-----DAGRIE-GAPKPVLEINPGHQLIAAL-ATCP-SEDKAFREDAVKLLLDQARVLDGDRPEDPRAFAERLSRVFGRAL 627          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCJ (Chaperone protein htpG OS=Ehrlichia canis (strain Jake) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14
Identity = 63/199 (31.66%), Postives = 96/199 (48.24%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNE--KKFVDISKEDLE----LGDEDEVKER-----ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E Q+ IYYL  + L S K +P LE  V + IEV+ LI+P+D+     +  +     K V  + EDLE    L  ++EV E      ++K++ +    +  Q L   V+ V+VSK+L++SP  L          MER ++ Q       L + +  +ILEINP HPIV  +     N  ++      + LL   A I  G
Sbjct:  423 EGQDNIYYLTGNDLDSIKKSPQLEGFVSRGIEVILLIDPVDDFWTNVVTDYQRVPLKSVIRADEDLEKLAHLKKDEEVGESKDENPDSKEKVDAFVKYAIQVLDKLVSGVRVSKKLTNSPVCLAVADGSMDIRMERFLREQ-----KQLNY-KSTKILEINPKHPIVSRMIDEYANTGENAVLDNMLHLLLGQACILEG 615          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CAMHC (Chaperone protein htpG OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14
Identity = 57/208 (27.40%), Postives = 107/208 (51.44%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            +Q  IYY++    ++ K++P LE+   K+IEVL   + ID + +  +  F++     +   D    D+ E+  ++ +     + + IK+ L DKV  V++SKRL ++  VLV  K   +  M+ + K   +G  +  E +    ILEIN DH I+K L A      + ++  +  ++++D A +S G   D  ++    + E++A A+
Sbjct:  422 EQKEIYYISGGKAETLKNSPLLEEFNAKNIEVLICDDEIDTIIMPMIGEFDKTPIKSVMDADFS-DDKGEISAQDLE-----IAEKIKENLKDKVKDVKISKRLKNALGVLVFDKNDPNYAMQAIYK--QMGQENLPEVL---PILEINKDHEIIKKLIA------NQSEIAKISNIIFDLAKLSEGQNIDDASEFAKNVSEIIAKAI 612          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_GLUOX (Chaperone protein htpG OS=Gluconobacter oxydans GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.937e-14
Identity = 64/206 (31.07%), Postives = 95/206 (46.12%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEK--KFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            Q+AIYYL  DSL + KS+  LE    + +EVL L +P+D    + L ++ EK  + V  S  DLE  +  E    E   +   L   +K  LGD+V  V+ + RL+ S  V+++   G    M+RLM+       S         ILEINP HP++K   A  +        K    +L D A +  G     P   G  +  ++A
Sbjct:  424 QDAIYYLTGDSLDALKSSAQLEGFRARGLEVLLLSDPVDGFWPERLSSYQEKPLRSVTHSHGDLEKFESVEADTTEA-ADVEKLVPALKDALGDQVKDVRSTVRLTGS-AVVITSDGGPDLTMQRLMR------RSGQAMPAMPPILEINPKHPLIK---ALAERVAKGESVKDYATVLLDLARVQEGEPLPDPTGFGRSLATLLA 618          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NITHX (Chaperone protein htpG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.754e-14
Identity = 55/216 (25.46%), Postives = 100/216 (46.30%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEV-KERETKQEFNL----LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGG 635
            + Q +IYYLA       +++P LE    + +EVL L +P+D   + +  +F  K F  +++ D +L     V    ET QE +        ++K  L D V+ V+ S+RL+ SP  L++ + G    +E+++    +G  +       + +LE+NP HP++  L  A     D    +    +L D A +  G  P    +   ++  ++   L G
Sbjct:  428 DNQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSAPSFEGKPFKSVTQGDTDLAAIPRVDASAETLQEVSASVTEFLAFLKTTLADLVSDVRSSERLTDSPVCLIAAESGPDRQLEKIL--VGVGQLTG----ASKPVLEVNPRHPLIASL--AALGDGDRAFKEDTARMLLDDARVLDGDRPSDALEFSRRLARIVERGLRG 635          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_SULNB (Chaperone protein htpG OS=Sulfurovum sp. (strain NBC37-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 61/210 (29.05%), Postives = 99/210 (47.14%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLI-EPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSP-CVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            ++  IYY+     K  +++P LE   + +IEVL +  E +D +    + ++ E  F DI+  D      +E KE E  +EF  L D IK+ LGD+V +V++S RL+ SP CVL           + +    A+      E      ILEINP+H ++K L+       D +       +L D+A +S G  P       +++  +   AL
Sbjct:  423 EKKEIYYIVGADEKVLRNSPLLEAYKKANIEVLIMDDEEVDSIVAPMIGSYKEWTFKDITTIDAPDSKTEEEKE-EISKEFKPLTDKIKEVLGDEVKEVKISTRLTESPSCVLKDAS-------DPMAGMAAMFAQMGQEMPEIPLILEINPEHEMIKKLD----KVEDESLFNDLSWILLDSAKLSEGLEPKDKGAFAHRVASLATKAL 620          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METPB (Chaperone protein htpG OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 58/206 (28.16%), Postives = 91/206 (44.17%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            +Q AIYYL  D +++ K++  LE    + +EVL L + +D    + L  F +K    +++   +L   + E +  E     + L   +K  L   V+ V+V+ RL  S  VL +   G    M+RL++    G      F     ILEINP H +++ LN     A    D K     L D A +  G TP  P      +   +A
Sbjct:  420 EQEAIYYLVADDVEALKNSAQLEGFRARGVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGEAAEDAPALDRLVAALKLALEPDVSDVRVTDRLVDSAVVLAASGMGPDLQMQRLLRRAGRG------FGGSAPILEINPRHALIRSLN---DRAEAGEDLKAEAGTLLDLARVQDGDTPRDPVAFARAVAAALA 616          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_EHRRG2.041e-1427.06Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
H90B4_HUMAN2.041e-1435.29Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]
HTPG_SULDN2.665e-1429.38Chaperone protein htpG OS=Sulfurimonas denitrifica... [more]
HTPG_RHIME2.665e-1428.50Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
HTPG_EHRCJ4.546e-1431.66Chaperone protein htpG OS=Ehrlichia canis (strain ... [more]
HTPG_CAMHC4.546e-1427.40Chaperone protein htpG OS=Campylobacter hominis (s... [more]
HTPG_GLUOX5.937e-1431.07Chaperone protein htpG OS=Gluconobacter oxydans GN... [more]
HTPG_NITHX7.754e-1425.46Chaperone protein htpG OS=Nitrobacter hamburgensis... [more]
HTPG_SULNB1.013e-1329.05Chaperone protein htpG OS=Sulfurovum sp. (strain N... [more]
HTPG_METPB1.727e-1328.16Chaperone protein htpG OS=Methylobacterium populi ... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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