FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METEP (Chaperone protein htpG OS=Methylobacterium extorquens (strain PA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 57/206 (27.67%), Postives = 91/206 (44.17%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            +Q AIYYL  D +++ K++  LE    + +EVL L + +D    + L  F +K    +++   +L   + E +  E     + L   +K  L   V+ V+ + RL  S  VL +   G    M+RL++    G      F     ILEINP H +++ LN   + A    D K     L D A +  G TP  P      +   +A
Sbjct:  420 EQEAIYYLVADDVEALKNSAQLEGFRARGVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGETAEAAPALDTLVAALKLALEPDVSDVRTTDRLVDSAVVLATSGMGPDLQMQRLLRRAGRG------FGGSAPILEINPRHALIRSLN---ERAEAGEDLKAEAGTLLDLARVQDGDTPRDPVAFARAVAAALA 616          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 61/218 (27.98%), Postives = 95/218 (43.58%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDG 656
            +Q AIYYL  D +++ K++  LE    + +EVL L + +D    + L  F +K    +++   +L   + E +  E     + L   +K  L   V+ V+ + RL  S  VL +   G    M+RL++    G      F     ILEINP H +++ LN   + A    D K     L D A +  G TP  P      +    A AL G   +  G
Sbjct:  420 EQEAIYYLVADDVEALKNSAQLEGFRARRVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGETAEAAPALDTLVAALKLALEPDVSDVRTTDRLVDSAVVLATSGMGPDLQMQRLLRRAGRG------FGGSAPILEINPRHALIRSLN---ERAEAGEDLKAEAGTLLDLARVQDGDTPRDPVAFARAV----AAALAGTAAKPAG 624          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 55/199 (27.64%), Postives = 99/199 (49.75%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++       +E    ++++  E+  L D+ K+ LG  V  V++SK+L+SSP  L   +      MER L++ + + + S+       + LE+NP + I++    DL A  KN       +  V L++D A I  G
Sbjct:  414 EGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHTIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NEELVKLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 55/199 (27.64%), Postives = 99/199 (49.75%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL------GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++       +E    ++++  E+  L D+ K+ LG  V  V++SK+L+SSP  L   +      MER L++ + + + S+       + LE+NP + I++    DL A  KN       +  V L++D A I  G
Sbjct:  414 EGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NEELVKLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13
Identity = 59/211 (27.96%), Postives = 100/211 (47.39%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERET-------KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            Q AIYY+A +  +  + +P  E    +  EVL + + ID + + ++  + E +   I++    LG E+E++  E        +Q F  L + +   L D V +V++SKRLS S   +V  +   +  MERLM+A      S +     + ILEIN  H +V+ L    K + D    +    +L D AL+  G    S  D   ++  ++A
Sbjct:  440 QKAIYYIAGNDDRVLRQSPHAESYRLQGFEVLVMSDDIDGIVMPSVSKYKEWELRAINR----LGSEEELRPNEETDAAAQREQGFKPLLERLTHILSDSVKEVRLSKRLSDSVSCIVIDENDPTVQMERLMRATGQTHKSKI-----KPILEINASHTLVQKL----KESTDEAFVEDLAFVLLDQALLIEGMDVGSSVDFVKRVNRLLA 637          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NITWN (Chaperone protein htpG OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.848e-13
Identity = 57/217 (26.27%), Postives = 98/217 (45.16%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISK--------EDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q +IYYLA       +++P LE    + +EVL L +P+D   + +  +F  K F  +++          L+ G E      E   EF     ++K  L D V+ V+ S RL+ SP  LV+ + G    +E+++    +G  +       + +LE+NP+HP+V  L  A     D    + A  +L D A +  G  P    +   ++  ++   L
Sbjct:  423 ENQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSGPSFEGKPFKSVTQGAADLAAIPRLDAGTEPSPDVSEGVTEF---LAFLKTTLSDLVSDVRSSDRLTDSPVCLVAAESGPDRQLEKIL--LGVGQLAG----ASKPVLEVNPNHPLVASL--AALGQDDREFKEDAARMLLDDARVLDGDRPSDALEFSRRLIRLVERGL 628          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 54/198 (27.27%), Postives = 96/198 (48.48%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG------DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++        +     +++  E+ LL D+ K+ LG+ V +V++SK+L+ SP  L          MER +  Q    ++S       + LE+NP + I++    DL A  KN       +  V+L++D A I  G
Sbjct:  414 EGQNTIYYLSGDNPDKLLSSPQIEGLLNKNIDVLLFTDTVDDFWVNVNSEYKGYAIKSATRSDIDVEHTTSRPQDKNTDSKKSDDEYKLLTDYFKEILGELVKEVKISKKLTLSPACLAVSDTAMDIRMERFLIEQKQIASAS------AKNLELNPKNKIIEKIFNDLKANNKN------NEELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_RICPR (Chaperone protein htpG OS=Rickettsia prowazekii GN=htpG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 54/199 (27.14%), Postives = 98/199 (49.25%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD------EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMER-LMKAQALGDTSSLEFMRGRRILEINPDHPIVK----DLNAACKNAPDSTDAKRAVDLLYDTALISSG 566
            E QN IYYL+ D+     S+P +E L+ K+I+VL   + +D+  +     +        ++ D+++        +     +++  E+ LL D+ K+ LG+ V +V++SK+L+ SP  L          MER L++ + + + S+       + LE+NP + I++    DL A  KN          V+L++D A I  G
Sbjct:  414 EGQNTIYYLSGDNPDKLLSSPQIEGLLNKNIDVLLFTDTVDDFWVNVNSEYKGYAIKSATRSDIDVEQTTSQPKDKNTDSKKSDNEYKLLTDYFKEILGELVKEVKISKKLTLSPACLAVSDTAMDIRMERFLIEQKQIANASA-------KNLELNPKNKIIEKIFNDLKANNKN------NNELVNLIFDQACILEG 599          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 62/207 (29.95%), Postives = 106/207 (51.21%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            +Q  I+Y+A ++    +++P LE+  QK+IEVL + + ID +    L+ F   KFV I+    ++ D++E+ + E K  F  L    K+ L D+V  V+++ RL  SP  +V  K      M++L+K   +G   +      + ILEINP H I   L    KN  + T +     L+ + A +S G   D+PA+    + +++  A
Sbjct:  419 EQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPMLE-FEGLKFVAIN----QVEDKNELSDEE-KNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKLDFAMQQLLK--QMGQEQNF-----KPILEINPKHAIFTGL----KN--NETFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HELAH (Chaperone protein htpG OS=Helicobacter acinonychis (strain Sheeba) GN=htpG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 57/196 (29.08%), Postives = 95/196 (48.47%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED--LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTA-LISSGFTPDS 581
            E Q +IYYL  ++L   K++P LEK  QK  +VL L + ID   + ++  +++  F D S  +   ELG E E+ + E K +F  L    ++ L D++  V++S  L+S+  ++   +    AN+ R M                ++ LE+NP+H I++ L        D       + LLYD A L+  G   D+
Sbjct:  426 ENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMPFRDASHSESLKELGLE-EIND-EVKNQFKDLIKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANLMRQM---------GQNMPESKKTLELNPNHAILQKL----LKCEDKEQMSAFIWLLYDGAKLLEKGALKDA 606          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_METEP1.727e-1327.67Chaperone protein htpG OS=Methylobacterium extorqu... [more]
HTPG_METC41.727e-1327.98Chaperone protein htpG OS=Methylobacterium chlorom... [more]
HTPG_RICBR2.256e-1327.64Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB82.256e-1327.64Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_TREPA2.947e-1327.96Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]
HTPG_NITWN3.848e-1326.27Chaperone protein htpG OS=Nitrobacter winogradskyi... [more]
HTPG_RICTY5.026e-1327.27Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_RICPR5.026e-1327.14Chaperone protein htpG OS=Rickettsia prowazekii GN... [more]
HTPG_CAMJD1.910e-1229.95Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_HELAH2.494e-1229.08Chaperone protein htpG OS=Helicobacter acinonychis... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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