FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 62/207 (29.95%), Postives = 104/207 (50.24%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            +Q  I+Y+A ++    +++P LE+  QK+IEVL + + ID +    L+ F   KFV I+    ++ D++E+ + E K  F  L    K+ L D+V  V+++ RL  SP  +V  K      M++L+K   +G   +      + ILEINP H I   L     N   S D      L+ + A +S G   D+PA+    + +++  A
Sbjct:  419 EQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPMLE-FEGLKFVSIN----QVEDKNELSDEE-KNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLK--QMGQEQNF-----KPILEINPKHAIFTGLK---NNESFSAD---IATLVLNMAKLSEGMGVDNPAEFNASLTKIINKA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12
Identity = 58/196 (29.59%), Postives = 98/196 (50.00%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED--LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTA-LISSGFTPDS 581
            E Q +IYYL  ++L   K++P LEK  QK  +VL L + ID   +  +  +++  F D S  +   ELG E E+ + E K +F  L    ++ L D++  V++S  L+S+  ++   +    AN  R M  Q++ ++        ++ LE+NP+H I++ L        D       + LLYD A L+  G   D+
Sbjct:  426 ENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFRDASHSESLKELGLE-EIND-EVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANFMRQM-GQSVPES--------KKTLELNPNHAILQKL----LKCEDKEQLSAFIWLLYDGAKLLEKGALKDA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12
Identity = 62/207 (29.95%), Postives = 104/207 (50.24%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            +Q  I+Y+A ++    +++P LE+  QK+IEVL + + ID +    L+ F   KFV I+    ++ D++E+ + E K  F  L    K+ L D+V  V+++ RL  SP  +V  K      M++L+K   +G   +      + ILEINP H I   L     N   S D      L+ + A +S G   D+PA+    + +++  A
Sbjct:  419 EQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPMLE-FEGLKFVAIN----QVEDKNELSDEE-KNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLK--QMGQEQNF-----KPILEINPKHAIFTGLK---NNESFSAD---IATLVLNMAKLSEGMGVDNPAEFNASLTKIINKA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12
Identity = 62/207 (29.95%), Postives = 104/207 (50.24%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            +Q  I+Y+A ++    +++P LE+  QK+IEVL + + ID +    L+ F   KFV I+    ++ D++E+ + E K  F  L    K+ L D+V  V+++ RL  SP  +V  K      M++L+K   +G   +      + ILEINP H I   L     N   S D      L+ + A +S G   D+PA+    + +++  A
Sbjct:  419 EQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPMLE-FEGLKFVAIN----QVEDKNELSDEE-KNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLK--QMGQEQNF-----KPILEINPKHAIFTGLK---NNESFSAD---IATLVLNMAKLSEGMGVDNPAEFNASLTKIINKA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HELPY (Chaperone protein htpG OS=Helicobacter pylori GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 58/196 (29.59%), Postives = 98/196 (50.00%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKED--LELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTA-LISSGFTPDS 581
            E Q +IYYL  ++L   K++P LEK  QK  +VL L + ID   +  +  +++  F D S  +   ELG E E+ + E K +F  L    ++ L D++  V++S  L+S+  ++   +    AN  R M  Q++ ++        ++ LE+NP+H I++ L        D       + LLYD A L+  G   D+
Sbjct:  426 ENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFKDASHSESLKELGLE-EIHD-EVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANWMRQM-GQSVPES--------KKTLELNPNHAILQKL----LKCEDKEQLSAFIWLLYDGAKLLEKGALKDA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 61/207 (29.47%), Postives = 104/207 (50.24%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            +Q  I+Y+A ++    +++P LE+  QK+IEVL + + ID +    L+ F   KF+ I+    ++ D++E+ + E K  F  L    K+ L D+V  V+++ RL  SP  +V  K      M++L+K   +G   +      + ILEINP H I   L     N   S D      L+ + A +S G   D+PA+    + +++  A
Sbjct:  419 EQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPMLE-FEGLKFIAIN----QVEDKNELSDEE-KNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLK--QMGQEQNF-----KPILEINPKHAIFTGLK---NNESFSAD---IATLVLNMAKLSEGMGVDNPAEFNASLTKIINKA 606          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 59/206 (28.64%), Postives = 90/206 (43.69%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDI--SKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMA 620
            Q AIY L  D  K+  S+  +E    + IEVL L + +D    + L  F+ K    I  S +DL     +   E E     +L+   +K+ L D V  V+ S+RL  S  +L +   G    M+RL++    G      F  G  +LE+NP H +V+ L    K   D  +A +    L D A +  G  P  P     ++   +A
Sbjct:  413 QEAIYILVGDDTKALASSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSITQSADDLSAFAPEGESEGEAADLADLV-PKLKEILKDDVTDVRASQRLVESAVLLSASSGGPDLQMQRLLRRAGRG------FGAGLPVLELNPRHALVRRLAERAKTGEDIAEAAQT---LLDLAHVQGGDAPRDPVAFARRVATALA 608          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVS 308
            Q  IYY+  ++     ++ F+E L +  +EV+Y+IE ID+  +Q L+    K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS
Sbjct:  173 QKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDMLEKKVKKVVVS 274          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HELHP (Chaperone protein htpG OS=Helicobacter hepaticus GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 60/212 (28.30%), Postives = 104/212 (49.06%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDI-SKEDL-ELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLM--KAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            +Q +IYY+  ++  + K+AP LEK  QK  +VL L + ID + +  +  +++     I SKE L ELG+E    +  T+  +  L    K  LG+++A+V++S  L  +P  L+  K   +  M  LM    Q + +T        + IL++N  HP+ + L  A          K++  LL+  ALI  G T  +  D   ++  ++  +L
Sbjct:  425 EQKSIYYMLGENKDALKNAPLLEKFAQKGFDVLLLSDEIDAIVMPMVGEYDKVPLKSINSKEALAELGEES--IDEATQNAYEPLIKGFKDALGEQIAEVKLSS-LGDAPLTLI--KEDNNPMMANLMAQMGQKVPET--------KPILQLNITHPLFEKLKTA-----QEDKIKQSALLLFGAALILEGSTLKNAKDFNTELNSLLLQSL 618          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_HELPJ (Chaperone protein htpG OS=Helicobacter pylori J99 GN=htpG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDIS-KEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTA-LISSGFTPDS 581
            E Q +IYYL  ++L   K++P LEK  QK  +VL L + ID   +  +  +++  F D S  E L+     E+ + E K +F  L    ++ L D++  V++S  L+S+  ++        AN  R M  Q++ ++        ++ LE+NP+H I++ L        D       + LLYD A L+  G   D+
Sbjct:  426 ENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFRDASHSESLKELGLAEIHD-EVKDQFKDLIKAFEENLKDEIKGVELSGHLTSAVALIGDEPNAMMANWMRQM-GQSVPES--------KKTLELNPNHAILQKL----LKCEDKEQLSAFIWLLYDGAKLLEKGALKDA 606          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_CAMJE2.494e-1229.95Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_HELPH4.255e-1229.59Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_CAMJJ4.255e-1229.95Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ84.255e-1229.95Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_HELPY5.557e-1229.59Chaperone protein htpG OS=Helicobacter pylori GN=h... [more]
HTPG_CAMJR5.557e-1229.47Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_METNO2.112e-1128.64Chaperone protein htpG OS=Methylobacterium nodulan... [more]
HS905_HUMAN2.758e-1137.25Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]
HTPG_HELHP3.602e-1128.30Chaperone protein htpG OS=Helicobacter hepaticus G... [more]
HTPG_HELPJ8.024e-1128.72Chaperone protein htpG OS=Helicobacter pylori J99 ... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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