FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.215e-44
Identity = 87/208 (41.83%), Postives = 133/208 (63.94%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDK-VAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  I+YL   S +  + +PFLE+L +K+ EV+Y  +P+DE  +Q L  + +KKF ++SKE L+LG + ++K+   K+ F  L DW K+ L  + +  V++S RL ++PCV+V+ K+GWS+NME++M+AQ L D S   +MRG+R+LEINP HPI+K+L        DS   K+   L+Y TAL+ SGF    P D  + IY  +  +L
Sbjct:  562 QKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKD--LKESFKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSL 767          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.227e-43
Identity = 90/212 (42.45%), Postives = 136/212 (64.15%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  IY++  ++     ++ F+E+L +  +EV+Y+IEPIDE  +Q L+ F  K  V ++KE LEL +++E K++  E K +F  LC  +K  L  KV KV VS RL +SPC +V+  +GW+ANMER++KAQAL D S++ +M  ++ LEINPDH I++ L    +   +    K  V LLY+TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  487 ENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLG 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.602e-43
Identity = 93/212 (43.87%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQ-EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACK-NAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  +YY+  +S+K+   +PFL+ L +K  EVL+L++PIDE A+  L+ F  KK VDI+K D EL + E+E K+RE ++ E++ L   +K  LGDKV KV VS +L  +PC + +G+FGWSANMER+MKAQAL DTS   +M  ++  EI+P  PI+K+L    + +  +    K  V LL++T+L+ SGFT + PA    +I++++A+ L
Sbjct:  458 EHQKNMYYITGESIKAVSKSPFLDSLKEKGFEVLFLVDPIDEYAMTQLKEFEGKKLVDITK-DFELEETEEEKKQREAEEKEYDGLAKALKNVLGDKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKELKQKVEADGENDKTVKSIVQLLFETSLLVSGFTIEEPAGFAERIHKLVALGL 668          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.092e-43
Identity = 89/211 (42.18%), Postives = 139/211 (65.88%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IY++  +S ++  S+ F+E++ ++  EV+Y+ +PIDE  +Q L+ ++ KK V ++KE LEL + +E K++  E K +F  LC  +K  L  KV KV VS RL SSPC +V+ ++GWSANMER+MKAQAL D+S++ +M  ++ LEINPDH ++K L    +   +    K  V LL++TAL+SSGF+ + P    ++IY M+ + L
Sbjct:  468 ENQKQIYFITGESREAVASSAFVERVKRRGFEVIYMTDPIDEYCVQQLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDILEKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGL 678          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.732e-43
Identity = 90/211 (42.65%), Postives = 136/211 (64.45%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IYY+  +S +   ++ F+E++  +  EVLY+ +PIDE  +Q L+ ++ KK V ++KE LEL + +E K++  E K  +  LC  IK  L  K+ KV VS RL SSPC +V+ ++GWSANMER+MKAQAL D+S++ +M  ++ LEINPDH I+K L    +   +    K  V LL++TAL+SSGF+ + P    ++IY M+ + L
Sbjct:  460 ENQTQIYYITGESKEVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDILEKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGL 670          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 2.732e-43
Identity = 92/227 (40.53%), Postives = 145/227 (63.88%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKE-DLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACK-NAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q  IYY+  +S+K+   +PFL+ L QK+ EVL+L++PIDE A   L+ F+ KK VDI+K+ +LE  +E++ +  + ++E+  L   +K  LGDKV KV VS +L  SPC + +G+FGWSANMER+MKAQAL DTS   +M  ++  EI+P   I+K+L    + +  +    K    LL++T+L+ SGFT + PA    +I++++++      G +  +EAE+ E
Sbjct:  463 EHQKQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDGKKLVDITKDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERIHKLVSL------GLNIDEEAETTE 683          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.087e-43
Identity = 90/226 (39.82%), Postives = 144/226 (63.72%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            +QN+IYY+  DS K  +S+PF+E+  ++  EVL++ EP DE  +Q ++ F +KKF  ++KE +   + +E K +  E K     LC  +K+ LGDKV KV VS+RLS+SPC+LV+ +FGWSA+ME++M+ QAL D+S  ++M  ++ +E+NP HPI+K+L    +   +    K  V LL+DT+L++SGF  + P     +I  M+ + L       + +E E+VE
Sbjct:  459 EQNSIYYITGDSKKKLESSPFIEQAKRRGFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKRQREEEKATCEKLCKTMKEVLGDKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSMAQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDPT-YAERINRMIKLGL----SLDEEEEEEAVE 679          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 91/227 (40.09%), Postives = 145/227 (63.88%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q  IYY+  DS K  +++PF+E+  ++ +EVL++ +PIDE  +Q ++ F +KKF  ++KE +   + +E K++  E K  +  LC  +K+ LGDKV KV VS RL++SPC+LV+ +FGWSA+ME++M+ QAL D+S   +M  ++ +EIN  H IVK+L    +   +   AK  + LL+DT+L++SGFT D P    ++I+ M+ +      G S  D+AE  E
Sbjct:  461 EGQKCIYYVTGDSKKKLETSPFIEQARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFLLFDTSLLTSGFTLDDPTAYADRIHRMIKL------GLSLDDDAEEEE 681          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.771e-42
Identity = 94/212 (44.34%), Postives = 137/212 (64.62%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDL-NAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IYY+  +S ++  ++PFLEKL +K  EVLY+ +PIDE A+Q L+ F+  K    +KE LE+ + +E K++  E K EF  L   IK+ L DKV KV +S R++ SPCVLV+ +FGWSANMER+MKAQAL D S   +M  ++ +E+N  H I+ ++ N A  +  D T  K  + LLYDTAL++SGF+ + P     +I+ M+ + L
Sbjct:  470 EGQKDIYYITGESRQTVANSPFLEKLTKKGYEVLYMTDPIDEYAVQQLKEFDNHKLRCCTKEGLEIDESEEEKKKFEELKAEFEPLLKLIKEVLHDKVDKVVLSNRITDSPCVLVTTEFGWSANMERIMKAQALRDNSMTSYMVSKKTMEVNGHHSIMIEIKNKAAVDKSDKT-VKDLIWLLYDTALLTSGFSLEEPTQFAARIHRMIKLGL 680          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.771e-42
Identity = 90/212 (42.45%), Postives = 139/212 (65.57%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKE-DLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACK--NAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  IYY+  +S+K+ + +PFL+ L  K+ EVL++++PIDE A+  L+ F +KK VDI+K+ +LE  DE++    +  +E+  L   +K  LGD+V KV VS +L  +P  + +G+FGWSANMER+MKAQAL DT+   +M  ++  EI+P  PI+K+L    +   A D T  K    LL+DTAL++SGFT D P++  ++I  ++A+ L
Sbjct:  463 EHQKNIYYITGESIKAVEKSPFLDALKAKNFEVLFMVDPIDEYAMTQLKEFEDKKLVDITKDFELEESDEEKAAREKEIKEYEPLTKALKDILGDQVEKVVVSYKLVDAPAAIRTGQFGWSANMERIMKAQALRDTTMSSYMSSKKTFEISPSSPIIKELKKKVETDGAEDKT-VKDLTTLLFDTALLTSGFTLDEPSNFAHRINRLIALGL 673          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
ENPL_HORVU4.215e-4441.83Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HS90A_CRIGR1.227e-4342.45Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSP90_PODAN1.602e-4343.87Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP90_BRUPA2.092e-4342.18Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP90_CAEBR2.732e-4342.65Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP90_ASPFU2.732e-4340.53Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP83_LEIAM6.087e-4339.82Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP83_TRYBB7.950e-4340.09Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_EIMTE1.771e-4244.34Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP90_CANAL1.771e-4242.45Heat shock protein 90 homolog OS=Candida albicans ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
back to top