FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33
Identity = 73/209 (34.93%), Postives = 134/209 (64.11%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEK-KFVDISKEDLELGD--EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKD-LNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IY++   S  S +++P +E+ ++K  EVL+L++PIDE  +  L  F++K KF ++++  ++  +  E+E + ++T +EF  L  ++K+ L DK+ KV +SK L+ SP +LVS  +G +AN ER+MKAQA    +  +F   ++I+EINP HP++K  LN   +   +    K +  +LY+T+ +++G++ D+P +  + IY++M
Sbjct:  513 EGQDQIYFITGKSKDSVEASPLIEQAIKKGYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTLSDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQAHQANAQPQF-NSKKIMEINPSHPLIKKLLNRLNEFGEEDETTKVSAHVLYETSALTAGYSIDNPTNFADFIYKLM 720          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32
Identity = 80/215 (37.21%), Postives = 120/215 (55.81%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQ-----EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKA--QALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            E Q  IY++  DS  + K +P LE    K  EVL+L +P+DE  +Q L  + EKK   + + D++L  E+E KE+ETKQ     E+  L  +IK  L D+V   ++SKRL+ S C LV+ ++G +ANMER++KA  Q + D+        +R+LE+NPDHPI+K +    +   +        DLLYD AL++ G     P      + E+M  A
Sbjct:  436 EAQQEIYFITGDSRATLKISPHLEAFKAKGYEVLFLTDPVDEWVVQALTEYKEKKLKAVDRGDVDLDSEEEKKEKETKQEEARKEYGDLISFIKSHLEDRVKDARLSKRLTDSACCLVADEYGINANMERILKAMNQPVPDS--------KRVLELNPDHPIMKIMTEIFRENKEDARLTDYADLLYDQALLTEGSPIKDPLRFTRLVSELMVKA 642          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31
Identity = 74/213 (34.74%), Postives = 123/213 (57.75%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE-----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMA 626
            E Q  IYY+   S  + +++P LE   +K  EVLY+ +P+DE  +Q+L  ++ KK   + + DLEL   +E KE+E KQE     +  + D++K+QL DKV +V+ S RL+ S C LV+ ++G +ANME+++KA       + +    +R+LE+NPDHP+++ L++  +   ++        LLYD AL++ G     P      + E+M  A
Sbjct:  436 EAQKEIYYITGASRSALENSPHLEIFRKKGFEVLYMTDPVDEWVVQSLTDYDGKKLHAVDRGDLELDSAEEKKEKEAKQEEAKKQYQGVLDFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILKAM------NQDVPESKRVLELNPDHPLMQVLSSIFEKDKENPRLADYCGLLYDQALLTEGSPVPDPLRFTRLVAELMVKA 642          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28
Identity = 83/213 (38.97%), Postives = 121/213 (56.81%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEV---KERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVD---LLYDTALISSGFTPDSPADLGNKIYEMMA 620
            E Q AIYY+  DS  +AK +P LE   +K IEVL L + +DE  + +L  F+ KK   ++K DL+LG  EDE    ++++T+ E+  L + I+  LGD V +V+V+ RL+ SP  LV+G+   S N+ERL+KA       S      + ILEINPDH IV+ L        D TD  +  D   LL+D AL++ G   + PA    ++  M+A
Sbjct:  429 EGQEAIYYITADSFAAAKHSPHLEIFRKKGIEVLLLSDRVDEWLVSSLTEFDGKKLQSVAKGDLDLGKLEDEAEKEQQKKTEDEYKPLVERIQAALGDSVKEVRVTHRLTDSPACLVAGEHDLSGNLERLLKAAGQKTPGS------KPILEINPDHGIVQRLK-------DVTDEAKFADWAHLLFDQALLAEGGQLEDPAAFVRRVNAMLA 628          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 3
Query:   57 SAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            ++  +++L +  +EV+Y IEPIDE  +Q L+ F  K  V ++KEDLEL +++E K+              KQ+ G +  K + ++ L +S        +GW+ANMER+MKAQAL D S+  +M  ++ LEINPDH  +  L    +   +    K  V LLY+TAL+SS F  + P    N+IY M  + LG
Sbjct:  212 NSTIVQRLWKHGLEVIYTIEPIDEYCVQQLKEFEGKTLVSVTKEDLELPEDEEEKK--------------KQEEGKQKTKQKKNQSLRTS----AKSTYGWTANMERIMKAQALRDNSTTGYMAAKKHLEINPDHSFIDTLRQKAETDKNDKSVKDLVILLYETALLSSDFGLEGPQTHANRIYRMNKLGLG 385          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.435e-28
Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 3
Query:  153 FNEKKFVDISKEDLELGDEDEVKE--RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            F+ KK    +KE L++   +E K+     K E+  LC  IK  L  KV KV V +R++ SPCVLV+ +FGWSANMER+MKAQAL D S   +M  ++I+EIN  HPI+  L             K  + LL+DT+L++SGF  + P     +I+ M+ + L
Sbjct:    3 FDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVLHKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWLLFDTSLLTSGFALEEPTTFSKRIHRMIKLGL 163          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.043e-26
Identity = 70/212 (33.02%), Postives = 111/212 (52.36%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL---GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  I+Y   ++ +    +P LE    K  EVL L +P+DEV +  +  F+ K    I+K +++L   G+E + +  E ++EF  L  W+K  L D V +V++S RL+ SP  L++  FG +  + RL +A      S  +   G+RILE+NP HP+V  L  A ++  D        +LLY TAL++ G   D PA     + + +A  L
Sbjct:  439 EGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAEREEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRLARTL 644          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_AZOSE (Chaperone protein htpG OS=Azoarcus sp. (strain EbN1) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 80/218 (36.70%), Postives = 123/218 (56.42%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQ---EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWG 644
            E Q+ IYY+  +S  +AK++P LE   +K IEVL L + +DE  I NL  F+ K  V ++K  L+LG  EDE +++ET++   E+  L + +K  LG++V +V+V+ RL+ SP  LV+ +     N+ R++KA      +S      + ILEINP HP V  L    +   D         +L+D AL++ G T D PA    +I ++M MA+GG  G
Sbjct:  442 EGQDKIYYVTAESFNAAKNSPHLEIFRKKGIEVLLLTDRVDEWVIGNLPEFDGKALVSVAKGGLDLGKLEDEAEKKETEKAADEYKELLEKMKASLGERVKEVRVTHRLTDSPACLVADEHDVGMNLARILKAAGQQAPAS------KPILEINPQHPAVMRLKYEERQFDD------WAAVLFDQALLAEGGTLDDPATFVKRINQLM-MAMGGSAG 646          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 70/212 (33.02%), Postives = 111/212 (52.36%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL---GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  I+Y   ++ +    +P LE    K  EVL L +P+DEV +  +  F+ K    I+K +++L   G+E + +  E ++EF  L  W+K  L D V +V++S RL+ SP  L++  FG +  + RL +A      S  +   G+RILE+NP HP+V  L  A ++  D        +LLY TAL++ G   D PA     + + +A  L
Sbjct:  439 EGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRLARTL 644          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 72/196 (36.73%), Postives = 107/196 (54.59%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEFNL--LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSP 584
            E Q AIYY+  +S K+   +P LE L Q+  EVLY+ +P+DE A Q L+ F  K  V   + DL+L   DE K+ + +    L  L   +K  L + V +V+VS RL+ SP  LV  + G  A +ERL++ +  G        R +RILE+NP HP+++ L A     P +      ++LL+D AL++ G T   P
Sbjct:  430 EGQEAIYYVYGESRKAVADSPHLEALKQRGFEVLYMTDPVDEWAAQGLREFQGKPLVSALQADLKLQSTDEQKKEQEQHAEGLKTLTSKMKDVLQESVREVRVSDRLTDSPVCLVVPEGGSPAYLERLLQQRGRG----AGMPRVKRILEVNPKHPVIEHLKAVHDRDPAAAQVAEWIELLHDQALLTEGSTIADP 621          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
ENPL_DICDI2.563e-3334.93Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_PELPD3.701e-3237.21Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_GEOUR3.133e-3134.74Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_METFK1.114e-2838.97Chaperone protein htpG OS=Methylobacillus flagella... [more]
HS904_HUMAN1.114e-2836.98Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HSP90_PLAFP9.435e-2840.99Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HTPG_MYCA11.043e-2633.02Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_AZOSE1.362e-2636.70Chaperone protein htpG OS=Azoarcus sp. (strain EbN... [more]
HTPG_MYCPA1.779e-2633.02Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYXXD6.761e-2636.73Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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