FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 72/212 (33.96%), Postives = 118/212 (55.66%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE-----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRA--VDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q  IY++   S  + + +P LE   +K  EVL+L +P+DE  +Q L  +  KK   + + D+    E+E KE+E K+E     +  L  ++K++L ++V +V++S RL+ S C LV+ + G +ANMER+++A       +      +RILE+NPDHPI++ +  A     D T+ + A   DLLYD AL++ G     P      + E+M
Sbjct:  437 EGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWVVQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEVRLSNRLTDSACCLVADEHGLNANMERILRAM------NQTVPESKRILELNPDHPIMQVM--ATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELM 640          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_FRASC (Chaperone protein htpG OS=Frankia sp. (strain CcI3) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 73/214 (34.11%), Postives = 112/214 (52.34%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE-----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            + QN IYYL  DS    +++P +E    K  EVL L +P+DEV ++ +  F+ K    I+K +++L  +DE K  E ++E     F  L  W+  +L D V +V++S RL++SP  LV   F  +  +E++ +A         E  R +RILE+NP H +V  L AA +   DS       +LLY  AL++ G     PA     + E +A AL
Sbjct:  443 DAQNEIYYLTGDSRGMIENSPHMEAFRAKGYEVLILTDPVDEVWVERVAEFDGKPLKSIAKGEVDLDTDDEKKSSEAEREQLRKDFAALLPWLAAKLEDDVKEVRLSSRLTTSPACLVGDTFDMTPALEKMYRAM------GHEMPRPKRILELNPTHALVMGLRAAHERDADSAALGDTAELLYGMALLAEGGELRDPARFTRLLAERLAEAL 650          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_COXBU (Chaperone protein htpG OS=Coxiella burnetii GN=htpG PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 70/207 (33.82%), Postives = 116/207 (56.04%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            +QN IYY+  D+  SAK++P LE   +KDIEVL + + +DE  + +L  F  K    I+K  L+LGD   E++V+  + +++F+ L    K+ LG+K+  V+++ RL+ SP  +V  +   S +++RL+        +  +FM+ + ILEINP HP++       KN  D T   R  DLL + AL++ G     PA     + E++
Sbjct:  434 EQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL------IQTGQDFMQAKPILEINPSHPLI----LRVKNESDKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELL 630          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 70/207 (33.82%), Postives = 116/207 (56.04%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            +QN IYY+  D+  SAK++P LE   +KDIEVL + + +DE  + +L  F  K    I+K  L+LGD   E++V+  + +++F+ L    K+ LG+K+  V+++ RL+ SP  +V  +   S +++RL+        +  +FM+ + ILEINP HP++       KN  D T   R  DLL + AL++ G     PA     + E++
Sbjct:  434 EQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL------IQTGQDFMQAKPILEINPSHPLI----LRVKNESDKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELL 630          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 70/207 (33.82%), Postives = 116/207 (56.04%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            +QN IYY+  D+  SAK++P LE   +KDIEVL + + +DE  + +L  F  K    I+K  L+LGD   E++V+  + +++F+ L    K+ LG+K+  V+++ RL+ SP  +V  +   S +++RL+        +  +FM+ + ILEINP HP++       KN  D T   R  DLL + AL++ G     PA     + E++
Sbjct:  434 EQNRIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL------IQTGQDFMQAKPILEINPSHPLI----LRVKNESDKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELL 630          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26
Identity = 72/217 (33.18%), Postives = 116/217 (53.46%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL---GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKR-----AVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E Q  I++   DS +    +P LE    K  EVL L EP+DEV +  +  F+ K    ++K +++L   G+  E +  E ++EF  L  W+K+ LG++V +V++S RL+ SP  L++  FG +  + R+ +A      +  +   G+R LE+NP HP+V  L  A  +A D  DAK+       +LLY TAL++ G  PD PA     + + +   L
Sbjct:  440 EDQTQIFFATGDSRQQILKSPHLEAFRAKGYEVLLLTEPVDEVWVGVVNEFDGKPLQSVAKGEVDLDSDGEGSEAEREEQQKEFADLLGWLKETLGEQVKEVRLSTRLTESPACLITDTFGITPALARIYRA------TGQDVPVGKRTLELNPTHPLVIGLRQAQASADD--DAKKEAVSETAELLYGTALLAEGGAPDDPARFAELLADRLTRTL 648          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 65/215 (30.23%), Postives = 119/215 (55.35%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDED-----EVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKR---AVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q+ I+Y   +S +   ++P LE    K  EVL L +P+DEV +     F+ K    +++ +++L  E+     E + +E +Q F  L +W+K+ L D V +V++S RL+ SP  L++  FG +  + R+ +A      S  +   G+RILE+NP+HP++  L  A +N  D T  ++     +LLY TAL++ G   ++PA     + ++++ ++
Sbjct:  448 QDQIFYATGESRQQVMNSPHLEAFKAKGYEVLLLTDPVDEVWVGMAPEFDGKPLKSVARGEVDLESEEEKTAHEAERKEQEQNFAGLVNWLKETLSDHVKEVRLSTRLTESPACLITDAFGITPALARIYRA------SGQDVPFGKRILELNPNHPLITGLQQAHENGGDDTHLRQLSETAELLYGTALLAEGGALENPAKFAGLLADLLSRSM 656          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 76/214 (35.51%), Postives = 117/214 (54.67%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVK---ERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q AIYY+  DS  +A+ +P LE   +K IEVL L + +DE    NL  F+ K    ++K  L+LG+ EDE +   ++E ++    L + IK  LG++V  V+V+ RL+ SP  LV+G+   SAN+ERL+KA      +       +  LEINP H +V  L+    +  D    K   +LL++ AL++ G   D PA    ++  ++AM  G
Sbjct:  430 EGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEFDGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLLKAAGQAAPTV------KPTLEINPSHALVTRLD----SESDEDRFKDWANLLFEQALLAEGGQLDDPASFVRRLNGLLAMLPG 633          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 75/206 (36.41%), Postives = 115/206 (55.83%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQ-EFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEM 614
            Q  IYY+  DSL +AKS+P LE   +KDIEV+ L + +DE  + NL  F  K    ++K  L+LG   DE E KE+E +  E+  L + IK+ LG++V  V+++ RL+ SP  LV+     S N+ERL+K+     T +      + ILEINP HP+V+ L +      + T       +L+D AL++ G   + PA    +I ++
Sbjct:  438 QEKIYYVTADSLTAAKSSPHLEIFRKKDIEVILLFDRVDEWLVANLPEFEGKHLQSVAKGSLDLGKLEDEAEKKEQEKEAGEYKELTEKIKEVLGEQVKDVRITLRLTESPACLVTETHDMSGNLERLLKSAGQKVTHT------KPILEINPYHPMVERLKS------EETHFADWSHILFDQALLAEGGQLEDPASFVKRINQL 631          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.724e-25
Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE---RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRA--VDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  I+Y   ++ +    +P LE    K  EVL L +P+DEV +  +  F+ K    ++K +++L  E++  E    E ++EF  L  W+++ L D V +V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+RILE+NP HP+V  L  A ++  D  +   A   +LLY TAL++ G   + PA     + E +A  L
Sbjct:  442 QQQIFYATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_GEOSL6.761e-2633.96Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_FRASC6.761e-2634.11Chaperone protein htpG OS=Frankia sp. (strain CcI3... [more]
HTPG_COXBU6.761e-2633.82Chaperone protein htpG OS=Coxiella burnetii GN=htp... [more]
HTPG_COXBR6.761e-2633.82Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_COXBN6.761e-2633.82Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_MYCUA8.831e-2633.18Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
HTPG_MYCLE1.967e-2530.23Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_THIDA4.383e-2535.51Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_NITMU4.383e-2536.41Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_MYCTU5.724e-2532.08Chaperone protein htpG OS=Mycobacterium tuberculos... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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