FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.724e-25
Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE---RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRA--VDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  I+Y   ++ +    +P LE    K  EVL L +P+DEV +  +  F+ K    ++K +++L  E++  E    E ++EF  L  W+++ L D V +V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+RILE+NP HP+V  L  A ++  D  +   A   +LLY TAL++ G   + PA     + E +A  L
Sbjct:  442 QQQIFYATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.724e-25
Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE---RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRA--VDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  I+Y   ++ +    +P LE    K  EVL L +P+DEV +  +  F+ K    ++K +++L  E++  E    E ++EF  L  W+++ L D V +V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+RILE+NP HP+V  L  A ++  D  +   A   +LLY TAL++ G   + PA     + E +A  L
Sbjct:  442 QQQIFYATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.724e-25
Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE---RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRA--VDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  I+Y   ++ +    +P LE    K  EVL L +P+DEV +  +  F+ K    ++K +++L  E++  E    E ++EF  L  W+++ L D V +V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+RILE+NP HP+V  L  A ++  D  +   A   +LLY TAL++ G   + PA     + E +A  L
Sbjct:  442 QQQIFYATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.476e-25
Identity = 70/211 (33.18%), Postives = 118/211 (55.92%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQE-----FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVK---DLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            Q  IY++   S  + + +P LE   +K+ EVL+L +P+DE  +Q +  ++ KK   + + D+    E+E KE+E K+E     +  L  ++K++L  +V +V++S RL+ S C LV+ + G +ANMER+++A       + +    +RILE+NPDHP+++   +L A  K  P   D     DLLYD AL++ G     P      + E+M
Sbjct:  439 QEEIYFITGTSRTALEQSPHLEIFRKKEYEVLFLTDPVDEWVVQGVTEYDGKKLKAVDRGDVIPATEEEKKEQEAKREEAFKQYGDLLSFVKEKLDARVKEVRLSSRLTDSACCLVADEHGLNANMERILRAM------NQDVPESKRILELNPDHPLMQVMANLFARDKANPRLGD---YCDLLYDQALLTEGSPISDPLRFTRLVAELM 640          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24
Identity = 71/209 (33.97%), Postives = 119/209 (56.94%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKER---ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q AIYY+  +S  +A+++P LE   +K +EVL L +P+DE  I +L  ++ K    ++K  L+LG+ ED+ +++   E  +    L + +K  L DKV++V+VS RL+ SP  LV G++ +   M+RL+KA      +     +G+  LEIN DHPIV+ ++    +A  S  A     +LYD AL++ G   + PA    ++  ++
Sbjct:  437 EGQEAIYYVTAESFNAARNSPHLEVFRKKGVEVLLLPDPVDEWVITHLNEYDGKPLKSVAKGGLDLGELEDQAEKKAAEEATESHKDLLEKLKGALEDKVSEVRVSTRLTDSPACLVVGEYDFGMGMQRLLKA------AGHAMPQGKPALEINIDHPIVQRMDTGLDDARFSDWAA----VLYDQALLTEGGQLEDPAAFVKRVNALL 635          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MARMS (Chaperone protein htpG OS=Marinomonas sp. (strain MWYL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD---EDEVKERETKQE-FNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVD---LLYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ IYY+  +S  +AK++P LE L +K  EVL L + IDE  + +LQ F  K F D++K  L+L D   E+E KE+E K E    L D +K  L +KVA V  + RL++SP  LV G++     M RL+      + +  +    +  LE+NPDHPIV  +++        TD +R  D   LL++ A +S G   + PA   +++ +++
Sbjct:  439 EGQDKIYYIYAESHNTAKNSPHLEILRKKGFEVLLLSDRIDEWMMSSLQEFEGKSFQDVTKGKLDLADQENEEEKKEKEEKAEKMKPLLDRMKAVLNEKVAGVNSTDRLTNSPACLVVGEYDMGLQMRRLL------EQAGQKLPESKPTLEVNPDHPIVAKMDS-------ETDEERFADMAWLLFEQATLSEGGQLEDPATFVSRMNKLI 637          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 65/213 (30.52%), Postives = 114/213 (53.52%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLEL-----GDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            Q+ I+Y A +S +    +P LE    K  EVL L +P+DEV ++++  F+ K    ++K +++L      D  + + +E +Q F  L  W+K+ L D V +V++S RL+ SP  L++  FG +  + R+ +A   G    +E    +RILE+NP+HP++  L  A K+     +     +LLY TAL++ G   + PA     + + +   +G
Sbjct:  442 QSQIFYAAGESRQQLLHSPHLEAFKAKGYEVLLLTDPVDEVWVESVHEFDGKPLQSVAKGEVDLDSDADNDGQDAERQEREQGFADLIAWLKEALSDHVKEVRLSTRLTDSPACLITDTFGITPALARMYRAS--GQPVPVE----KRILELNPNHPLITGLREAHKSRGADAELVGTAELLYGTALLAEGGVLEDPARFAGLLADRLTRTVG 648          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_MYCGI (Chaperone protein htpG OS=Mycobacterium gilvum (strain PYR-GCK) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24
Identity = 66/215 (30.70%), Postives = 116/215 (53.95%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERET-----KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q  I+Y A +S +   ++P LE    K  EVL L +P+DEV ++++  F+ K    ++K +++L  E + + +ET     ++EF  +  W+ + LGD V +V++S RL+ SP  L++  FG +  + R+ +A   G    +E    +RILE+NP HP+V  L  A ++     +     +LLY TAL++ G   + PA     + + +   +G
Sbjct:  440 EGQTQIFYAAGESRQQLLNSPHLEAFKAKGYEVLLLTDPVDEVWVESIHEFDGKPLQSVAKGEVDLDSEADKEAQETERQQREKEFADVIAWLTEVLGDHVKEVRLSTRLTDSPACLITDTFGITPALARMYRAS--GQPVPVE----KRILELNPTHPLVVGLREAHESRGADDELAGTAELLYGTALLAEGGALEDPARFAGLLADRLTRMVG 648          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_BURS3 (Chaperone protein htpG OS=Burkholderia sp. (strain 383) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24
Identity = 69/197 (35.03%), Postives = 111/197 (56.35%), Query Frame = 3
Query:    6 KQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG---DEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPA 587
            +Q+ IYY+  D+ ++AK++P LE   +K +EVL L + +DE  +  LQ F+ K    +++ DL+LG   DE++  + E  +    + + +K+ LGDKV +V+V+ RL+ SP  LV+     S  ++R++KA      +       + ILEINP+H +VK L A      DS D      LL+D AL++ G   D PA
Sbjct:  433 EQSRIYYVTADAWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLQEFDGKPLASVARGDLDLGELNDEEKKAQEEAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQLKA------DSADFGDWCHLLFDQALLAEGGMLDDPA 617          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 70/212 (33.02%), Postives = 115/212 (54.25%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERETKQEF----NLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDL---LYDTALISSGFTPDSPADLGNKIYEMM 617
            E Q+ +YYL  +S    K +P+LE   +K IEVL L++ IDE  +  L  F+ K FVDI++ DL+LG+ D   +++ ++E       L   IK  LG+ VA+V+VS RL+ SP VL  G+      M +L++A      S  +    + + E NP HP+++ L+A         D  R  DL   L+D A +++G +   PA+   ++ +++
Sbjct:  433 EGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFVDIARGDLDLGNLDSEADKKAQEEIAKTKEALASRIKATLGEDVAEVRVSHRLTDSPAVLAIGEGDLGLQMRQLLEA------SGQKVPETKPVFEFNPSHPLIEKLDA-------EQDMDRFADLSRILFDQAALAAGDSLKDPANYVRRLNKLL 631          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_MYCTA5.724e-2532.08Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCBP5.724e-2532.08Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO5.724e-2532.08Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]
HTPG_GEOMG7.476e-2533.18Chaperone protein htpG OS=Geobacter metallireducen... [more]
HTPG_ALHEH2.175e-2433.97Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
HTPG_MARMS2.841e-2435.38Chaperone protein htpG OS=Marinomonas sp. (strain ... [more]
HTPG_MYCVP3.710e-2430.52Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HTPG_MYCGI6.328e-2430.70Chaperone protein htpG OS=Mycobacterium gilvum (st... [more]
HTPG_BURS36.328e-2435.03Chaperone protein htpG OS=Burkholderia sp. (strain... [more]
HTPG_XYLFT1.079e-2333.02Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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