FC868618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAEQ (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ahpC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 371 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 EF V D+ G V+ F YP DF+FVCPTE+ ++YA+ ++L + VSTD+ F H AW S + L+Y +I D +++I++++ +L + G+A Sbjct: 22 EFKEVTQEDFKGSWNVVCF-YPADFSFVCPTELEDLQNQYAKLQELGVNVYSVSTDTHFVHKAW---HDHSDAISKLEYSMIGDPSQTITRNFDVLDEETGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: PRDX6_CHICK (Peroxiredoxin-6 OS=Gallus gallus GN=PRDX6 PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGG---LGDLKYPLIADITKSISKSYGILIPDQ 670 L+G+ AP+F A+ ++ D++G + ILF +P DFT VC TE+ + EF K N +++ +S DSV HLAW G + L +P+IAD + ++ G+L PD+ Sbjct: 5 LLGDEAPNFEADTTQG----GIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFSKRNVKMIALSIDSVPDHLAWSKDINAYNGDQPVEKLPFPIIADKDRELAVKLGMLDPDE 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: REHY_MAIZE (1-Cys peroxiredoxin PER1 OS=Zea mays GN=PER1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 37/124 (29.84%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 323 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGG--------LGDLKYPLIADITKSISKSYGILIPDQ 670 +G+T P+ ++ + +++ DY+G Y I+F +P DFT VC TE+ A + EFEK ++LG+S D V SH W GG + +P++AD + + ++ PD+ Sbjct: 6 IGDTVPNLELDSTHGK----IRIHDYVGDGYAIIFSHPADFTPVCTTEMAAMAGYAKEFEKRGVKLLGISCDDVESHRQWTKDVEAYGGKQQQQQATTTKVTFPILADPARDAIRQLNMVDPDE 125
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: REHY_ARATH (1-Cys peroxiredoxin PER1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 39/114 (34.21%), Postives = 57/114 (50.00%), Query Frame = 2 Query: 323 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIP 664 +G+T P+ E D+ KL DY + +LF +P DFT VC TE+ A + EF+K ++LG+S D V SH W+ + YP+IAD K I ++ P Sbjct: 6 LGDTVPNLEVETTHDK----FKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDP 115
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: TSA_ONCVO (Putative peroxiredoxin OS=Onchocerca volvulus GN=TSA PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 326 GNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPT-----DRKSGGLGD---LKYPLIADITKSISKSYGILIPDQ 670 GN PDF AE ++ FI+ D+IGK + ILF +P DFT VC TE+ EF+K N +++G+S DS SH W K G L YP+IAD +S++ G++ PD+ Sbjct: 8 GNKFPDFQAET--NEGFIS-SFYDWIGKDSWAILFSHPRDFTPVCTTELARLVQLAPEFKKRNVKLIGLSCDSADSHSKWADDILALYKMKCVGCDSEKKLPYPIIADEDRSLATELGMMDPDE 128
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: TDXH_TREDE (Probable peroxiredoxin OS=Treponema denticola GN=TDE_0011 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 317 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG 673 PL+G+ P A +KL + + +LF +P DFT VC TE AF EFEKL +++G+S D + SHL W+ ++ G+ ++ +P+IA SI+ G+L P +G Sbjct: 2 PLLGDDFPQLAVSTTHGP----MKLPCDLKGSWFVLFSHPADFTPVCTTEFVAFQKLMPEFEKLGVKLIGLSIDQIQSHLKWIEWIKEKLGV-EITFPVIA-ANDSIANQIGLLHPGKG 114
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: TDXH_METTM (Probable peroxiredoxin OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 38/116 (32.76%), Postives = 66/116 (56.90%), Query Frame = 2 Query: 317 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIP 664 PL+G+ P+ + +KL ++ ILF +P DFT VC TE AF + Y E +L+ E++G+S D VFSH+ W+ ++ ++++P+IAD T ++ + G++ P Sbjct: 2 PLIGDKFPEMEVQTTHGL----MKLPAEFKGRWFILFSHPADFTPVCTTEFVAFQEVYPELRELDCELVGLSVDQVFSHIKWIEWIEENLDT-EIEFPVIAD-TGRVADTLGLIHP 111
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAW (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain MW2) GN=ahpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAS (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain MSSA476) GN=ahpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAR (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain MRSA252) GN=ahpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120 The following BLAST results are available for this feature:
BLAST of FC868618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868618 ID=FC868618; Name=FC868618; organism=Citrus clementina; type=EST; length=679bpback to top |