FC868618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAN (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain N315) GN=ahpC PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAM (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ahpC PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAC (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain COL) GN=ahpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAAB (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=ahpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAA8 (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain NCTC 8325) GN=ahpC PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAA3 (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus aureus (strain USA300) GN=ahpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 320 LVGNTAPDFAAEAVFD---QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 L+ F A+A FD +F V D G + ++ FYP DF+FVCPTE+ ++Y E +KL + VSTD+ F H AW S + + Y +I D +++I++++ +L G+A Sbjct: 3 LINKEILPFTAQA-FDPKKDQFKEVTQEDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAW---HDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLA 120
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: TDXH_PYRAB (Probable peroxiredoxin OS=Pyrococcus abyssi GN=PYRAB10420 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 35/94 (37.23%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 383 VKLSDYIGK--KYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGIL 658 +KL D+ K K+ ILF +P DFT VC TE R EF KL E +G+S D VF+H+ W+ +++ G+ ++++P+IAD +++ G++ Sbjct: 20 IKLPDHFTKQGKWFILFSHPADFTPVCTTEFYGMQKRLEEFRKLGVEPIGLSVDQVFAHIKWMEWIKENLGV-EIEFPIIADDRGELAEKLGMI 112
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: TDXH_PYRHO (Probable peroxiredoxin OS=Pyrococcus horikoshii GN=PH1217 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 383 VKLSDYIGK--KYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGIL 658 +KL DY K K+ ILF +P DFT VC TE R EF KL E +G+S D VFSH+ W+ + + + ++ +P+IAD +++ G++ Sbjct: 20 IKLPDYFTKQGKWFILFSHPADFTPVCTTEFYGMQKRVEEFRKLGVEPIGLSVDQVFSHIKWIEWIKDNLSV-EIDFPVIADDRGELAEKLGMI 112
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: TDXH_CHLTE (Probable peroxiredoxin OS=Chlorobium tepidum GN=CT1747 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 317 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG 673 PL+G+ P+ + I L + +LF +P DFT VC TE AF R FEK+ +++G+S D VFSH+ WV +++ + D+ +P++A I+ G+L P +G Sbjct: 2 PLLGDDFPELKVQTTHGPMNIPGDLKG----SWFVLFSHPADFTPVCTTEFVAFQQRVEAFEKIGCKLIGMSVDQVFSHIKWVEWIKENLDV-DITFPIVA-ANDRIANKLGMLHPGKG 114
BLAST of FC868618 vs. ExPASy Swiss-Prot
Match: AHPC_STAHJ (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ahpC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 34/103 (33.01%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 371 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEKLNTEILGVSTDSVFSHLAWVPTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA 679 EF V D G + ++ FYP DF+FVCPTE+ ++Y + + L + VSTD+ F H AW S + ++Y +I D +++I++++ +L + G+A Sbjct: 22 EFKEVSQDDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYDKLQDLGVNVFSVSTDTHFVHKAW---HDHSDAISKIQYQMIGDPSQTITRNFDVLDEEAGLA 120 The following BLAST results are available for this feature:
BLAST of FC868618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868618 ID=FC868618; Name=FC868618; organism=Citrus clementina; type=EST; length=679bpback to top |