FC868624

Overview
NameFC868624
Unique NameFC868624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: XYLD_RHIME (Putative D-xylulose reductase OS=Rhizobium meliloti GN=R02526 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33
Identity = 68/128 (53.12%), Postives = 90/128 (70.31%), Query Frame = 2
Query:  293 LGPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            L P DVL+ ++ VG+CGSDVH+    ++  FVV EPM++GHE AGV+ +VGS+V+ L  GDRV +EPGI        K G YN+ P ++F+ATPPVHG L  +VVHPA   ++LPD+VS  EGAM EP
Sbjct:   24 LSPTDVLIGIRTVGVCGSDVHYYTHGKIGPFVVNEPMILGHEAAGVVLEVGSQVRHLKKGDRVCMEPGIPDLSSRSSKLGIYNVDPSVRFWATPPVHGCLTPEVVHPAAFTYRLPDHVSFAEGAMVEP 151          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32
Identity = 68/128 (53.12%), Postives = 85/128 (66.41%), Query Frame = 2
Query:  293 LGPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            LG  DV +++  VGICGSDVH+ +  R+  FVV EPMV+GHE +GVI   G  VK L  GDRV +EPGI   +    + G YNL P ++F+ATPP+ G L   V+HPA   FKLPDNVS  +GAM EP
Sbjct:   25 LGDDDVEIKIHTVGICGSDVHYYQHGRIGPFVVDEPMVLGHEASGVITAAGKNVKHLKVGDRVCMEPGIPDLQSPQSRAGIYNLDPAVRFWATPPIDGCLRESVIHPAAFTFKLPDNVSFAQGAMVEP 152          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: XYLD_AGRT5 (Putative D-xylulose reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu4318 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32
Identity = 70/144 (48.61%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  263 LKIQPFELPS------LGPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            L ++ F++P       LGP DV +R   VGICGSDVH+    ++  FVV  PMV+GHE +G + + GS+V  L  GDRV +EPGI        K G YN+ P ++F+ATPP+HG L  +V+HPA   +KLPDNVS  EGAM EP
Sbjct:   12 LSLRDFDIPGGAGSGELGPKDVRIRTHTVGICGSDVHYYTHGKIGHFVVNAPMVLGHEASGTVIETGSDVTHLKIGDRVCMEPGIPDPTSRASKLGIYNVDPAVRFWATPPIHGCLTPEVIHPAAFTYKLPDNVSFAEGAMVEP 155          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.382e-31
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 2
Query:  263 LKIQPFELP-SLGPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            L ++   LP  +GP DV + +  VG+CGSDVH+     +  +VV+ PMV+GHE AG + + G+ V+T   GDRV +EPG+        K G YN+ P++ F+ATPPVHG LA   VHPA   +KLPDNVS  EGAM EP
Sbjct:   12 LSLREIALPLDVGPDDVKIAIHTVGVCGSDVHYYTHGAIGSYVVRAPMVLGHEAAGTVVETGANVETFKAGDRVCMEPGVPNLSSRATKLGIYNVDPDVSFWATPPVHGVLAPYAVHPAAFTYKLPDNVSFAEGAMVEP 150          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.357e-31
Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 2
Query:  299 PYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            P +V++++KA GICGSD+H+    R+A++VV+ PMV+GHE +G++  +G  VKTL  GDRVALEPGI        K GRYNL P +KF ATPP  G+L        D  +KLPD+VS EEGA+ EP
Sbjct:   31 PNEVIIQIKATGICGSDIHYYTHGRIANYVVESPMVLGHESSGIVALIGENVKTLKVGDRVALEPGIPDRFSPEMKEGRYNLDPNLKFAATPPFDGTLTKYYKTMKDFVYKLPDDVSFEEGALIEP 156          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.021e-31
Identity = 66/149 (44.30%), Postives = 93/149 (62.42%), Query Frame = 2
Query:  230 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            N AA L G N ++I+   +P +   +VL+++  VGICGSDV    T      V+ +P+VIGHE AG + KVG +V +L  GDRVA+EP   C  C+ CK G+YNLC E ++ ++    G+L     H AD C KLPDN+++EEGA  +P
Sbjct:    4 NYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQP 152          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.170e-30
Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 2
Query:  230 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+H+ ++  +  +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K GRYNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EP
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGRYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEP 155          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.806e-30
Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = 2
Query:  230 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+H+ ++  +  +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K G YNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EP
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEP 155          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.915e-29
Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 2
Query:  230 NMAAWLMGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------GSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            N +  L  ++ +  + ++ P +  P DVLV++K  GICGSD+HF    R+ +FV+ +PMV+GHE AG + +VG  V +L  GD VA+EPGI     D  K G YNLCP M F ATP          G+L      P D   KLPD+VSLE GA+ EP
Sbjct:    4 NPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVSLELGALVEP 160          
BLAST of FC868624 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.430e-28
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 2
Query:  230 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHFLKTLRLADFVV-KEP---MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP-VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP 676
            N  A L    T+KI   E+P     +VL++++ VGICGSDVH  ++     F+  K+P   + +GHECAG +  VGS V+   PGDRV +EPG+ C  C +C  G+YN+CP++ F AT P   G+L + + HP    +KLPDN+   EGA+ EP
Sbjct:    3 NSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFES---GPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEP 153          
The following BLAST results are available for this feature:
BLAST of FC868624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
XYLD_RHIME1.130e-3353.13Putative D-xylulose reductase OS=Rhizobium melilot... [more]
XYLD_MORMO1.632e-3253.13D-xylulose reductase OS=Morganella morganii PE=1 S... [more]
XYLD_AGRT51.632e-3248.61Putative D-xylulose reductase OS=Agrobacterium tum... [more]
XYLD_RHILO1.382e-3148.20Putative D-xylulose reductase OS=Rhizobium loti GN... [more]
XYL2_YEAST2.357e-3151.59D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
DHSO_BOMMO4.021e-3144.30Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
DHSO1_YEAST1.170e-3044.00Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO2_YEAST5.806e-3043.33Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
XYL2_PICST4.915e-2943.95D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]
YDJJ_ECOLI1.430e-2842.86Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionC31002G07EF AbioticL1 Citrus clementina cDNA clone C31002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868624 ID=FC868624; Name=FC868624; organism=Citrus clementina; type=EST; length=676bp
TATGCCGGGGAGAAACAATAATCTACACGGTCAAATAAAAAGAACACTTG
ATGTTATGCTAAACTTGTCATTAAATATTCCTGCGACCGAATCAAATCAT
ATCCAATATCCAGAATCAGATAGTGTACAGAGTGAAGTCTCTGCTGTGCA
CTTGTGTTTTGAAGGGTGAAAAGCAAATATGGGCAAAGGAGGGATGTCGC
AAGGAGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATG
GGTGTCAACACCCTCAAGATTCAGCCTTTTGAGCTTCCTTCTCTGGGACC
ATATGATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATG
TGCATTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCT
ATGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGA
GGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCA
GCTGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCA
GAGATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCA
GGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCC
TGGAGGAAGGGGCTATGTGTGAGCCC
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