FC868630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.159e-39 Identity = 85/174 (48.85%), Postives = 107/174 (61.49%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHG--------TDG---GELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G + CG G + +G G T G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYCY+R Q + S PGQ YYGRGPIQ+++N NY CG A+G +LLN Sbjct: 48 GNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLN 221 HSP 2 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEP 698 R++G L+ +PDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VI P Sbjct: 213 RAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTP 261
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.159e-39 Identity = 85/164 (51.83%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G + CG G + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R Q S G PG +Y+GRGPIQ++ N NY CG A+GVDLLN Sbjct: 43 GNTNDYCGPGNCQSQCPGG---SPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLN 203 HSP 2 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEP 698 R++G L+ +PDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI +P Sbjct: 195 RAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQP 243
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.609e-39 Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 151 GHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD--XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVD 570 G+ + I+S +++ L +++D C ARGFYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG CY +++ S PG+ Y+GRGPIQ++WN NY G+ALG D Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFD 183 HSP 2 Score: 51.2174 bits (121), Expect = 1.609e-39 Identity = 19/49 (38.78%), Postives = 35/49 (71.43%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEP 698 ++LG + +P+++A ++F++A+WFWMT + KPSCH+V++ E P Sbjct: 178 QALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRP 226
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 89/165 (53.94%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G +Q GSG G G L +ISRE F +L +RND C ARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYCY R+++ S PG QY+GRGP+QL+WN NY +CG A+GVDLLN Sbjct: 35 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLN 189 HSP 2 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEPISN 707 R++G L+ +PDLL++DP +SFKSA WFWMT Q PKPSCH VII P S+ Sbjct: 181 RAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSS 232
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 89/165 (53.94%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G +Q GSG G G L +ISRE F +L +RND C ARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYCY R+++ S PG QY+GRGP+QL+WN NY +CG A+GVDLLN Sbjct: 57 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLN 211 HSP 2 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEPISN 707 R++G L+ +PDLL++DP +SFKSA WFWMT Q PKPSCH VII P S+ Sbjct: 203 RAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSS 254
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39 Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G ++ CG G C + +G G +DG +G I+ R++FE LL +RND C ARGFYTY+AF+ AA AFPAFG +GN RKRE+AAF QT HETTGGWP AP G ++WGYC+ ++ + SD PG +YYGRGPIQL++N NY G A+GVDLL+ Sbjct: 57 GTTSDFCGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLS 225
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 6.575e-38 Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 175 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLL 576 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT HETTGGWP AP G Y G Y+GRGPIQ+++N NY G+A+GVDLL Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------------------STSDYFGRGPIQISYNYNYGAAGKAIGVDLL 105 HSP 2 Score: 59.3066 bits (142), Expect = 6.575e-38 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEPIS 704 +++G L+ +PDL+ +D + FK+A+WFWMT Q PKPS H+VI P S Sbjct: 98 KAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSS 148
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37 Identity = 79/172 (45.93%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 97 GGSAQNCGSGAV------CGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G ++ CG+G CG T + GG + IIS +F+ +L +RND+ C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGWP AP G Y+WGYC+ ++ ++G+ P +YYGRGPIQ+T+N NY G+A+G DLLN Sbjct: 43 GSTSDYCGAGCQSQCSGGCGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCF-KEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLN 213
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.186e-37 Identity = 69/169 (40.83%), Postives = 91/169 (53.85%), Query Frame = 1 Query: 94 QGGSAQNCGSGAVCGERD------TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLL 576 +GG C G+ D T G + +++ + FE +LP+R+D C ARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYCY SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL Sbjct: 64 KGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL 225 HSP 2 Score: 53.5286 bits (127), Expect = 3.186e-37 Identity = 22/49 (44.90%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 555 SLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEMEP 698 ++G L+ +P+L+ATDP ++FK+A+W WMTA+ P +PS H V+ + P Sbjct: 219 AIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTP 267
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.186e-37 Identity = 69/169 (40.83%), Postives = 91/169 (53.85%), Query Frame = 1 Query: 94 QGGSAQNCGSGAVCGERD------TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLL 576 +GG C G+ D T G + +++ + FE +LP+R+D C ARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYCY SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL Sbjct: 64 KGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL 225 HSP 2 Score: 53.5286 bits (127), Expect = 3.186e-37 Identity = 22/49 (44.90%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 555 SLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEMEP 698 ++G L+ +P+L+ATDP ++FK+A+W WMTA+ P +PS H V+ + P Sbjct: 219 AIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTP 267 The following BLAST results are available for this feature:
BLAST of FC868630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868630 ID=FC868630; Name=FC868630; organism=Citrus clementina; type=EST; length=709bpback to top |