FC868630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.263e-35 Identity = 78/173 (45.09%), Postives = 104/173 (60.12%), Query Frame = 1 Query: 97 GGSAQNCGSGAV------CGERDTGHGTDGGELG--KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSH--GSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G ++ CGSG CG + GG G I+SR +F+ +L +RND C A+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF AQT HETTGGW AP G Y+WGYC+ + + GSD +YYGRGPIQ+++N NY G+A+G +LL+ Sbjct: 45 GSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLS 217
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32 Identity = 68/141 (48.23%), Postives = 94/141 (66.67%), Query Frame = 1 Query: 157 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G+ ++G I++ ++F ++L RND+RC A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + + +YGRGPIQLT NY G+A+G DL+N Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQ------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVN 140 HSP 2 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEMEP 698 +++G LV +PDL+ATD +SFK+AIWFWMTAQ KPSCH+VI + P Sbjct: 132 QAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTP 180
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 3.847e-31 Identity = 59/164 (35.98%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERD--TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVS-HGSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLL 576 G Q S +V G R +G+ T +++ +F+ + +R D C ++GFY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ Sbjct: 102 GSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLI 262 HSP 2 Score: 61.2326 bits (147), Expect = 3.847e-31 Identity = 20/45 (44.44%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIID 686 +++G L+++PDL+ DP++SFK+A+WFWM+ KPSCH+++++ Sbjct: 255 QAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN 299
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.376e-30 Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 175 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 +G I++ ++F ++L RND RC A GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYC++RQ +YYGRGPIQLT NY + G A+ DL+N Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVN 146
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 175 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 +G I++ ++F ++L RND RC A GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYC++RQ +YYGRGPIQLT NY + G A+G +L+N Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNRNNYEKAGTAIGQELVN 146
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 118 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYI 432 G G G G G G L II MF+D+L YRND +C A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HET G WP A G +Y WGYC++ Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM 170
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.368e-24 Identity = 58/162 (35.80%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVD 570 G + CG+G G D T+ + I++ E F L+ + D+ C A+GFYT DAF+ AA +P+FG +G+ KREIAAFFA HET +CYI ++ S P YYGRGP+Q++WN NY G+++G D Sbjct: 43 GTGSDYCGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFD 189 HSP 2 Score: 33.113 bits (74), Expect = 6.368e-24 Identity = 12/29 (41.38%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFW 638 +S+G + PD +A PVL+F++A+W+W Sbjct: 184 QSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 9.474e-22 Identity = 57/168 (33.93%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLL 576 G + CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +CYI +++ S P Y+GRGPIQL+WN NY CG++L ++LL Sbjct: 42 GSTDAYCGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLL 191 HSP 2 Score: 36.1946 bits (82), Expect = 9.474e-22 Identity = 12/35 (34.29%), Postives = 25/35 (71.43%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTAQPP 656 +SL L+ P+L++++P ++F++ +WFWM + P Sbjct: 184 QSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.529e-21 Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVD 570 G + + CG G G +G G G + +++ F + + C + FYT AF+ A K +P F + G++ KREIAAFFA HET +CYI +++ + D +YYGRGP+Q++WN NY G A+G D Sbjct: 38 GTTDEYCGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFD 189 HSP 2 Score: 33.4982 bits (75), Expect = 3.529e-21 Identity = 13/32 (40.62%), Postives = 22/32 (68.75%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMTA 647 R++G + P +A D V++FK+A+WFWM + Sbjct: 184 RAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.362e-20 Identity = 48/152 (31.58%), Postives = 69/152 (45.39%), Query Frame = 1 Query: 118 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALG 564 G G G G G+ G + +++ F + + C + FYT AF+ A A+P F + G E KREIAAFFA HET +CYI +++ + D +YYGRGP+Q++WN NY G +G Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI-KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIG 198 HSP 2 Score: 34.6538 bits (78), Expect = 6.362e-20 Identity = 13/30 (43.33%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWM 641 R +G + P+ +A D V++FK+A+WFWM Sbjct: 195 RDIGFNGLADPNRVAQDAVIAFKTALWFWM 224 The following BLAST results are available for this feature:
BLAST of FC868630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868630 ID=FC868630; Name=FC868630; organism=Citrus clementina; type=EST; length=709bpback to top |