FC868630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.399e-19 Identity = 58/166 (34.94%), Postives = 75/166 (45.18%), Query Frame = 1 Query: 112 NCGSGAVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWP-DAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVD 570 NC SG G T G G G + I+S+ F+ ++ + C + FYT AF+ A P FGN G+ KREIAAFFA HETT + G+ YC D G+ YYGRGP+QL+WN NY G+A+G D Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYC---------DQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFD 208 HSP 2 Score: 34.6538 bits (78), Expect = 1.399e-19 Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWMT 644 +++G + +P+ +ATD SFK+A+WFWMT Sbjct: 203 QAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.077e-19 Identity = 49/163 (30.06%), Postives = 69/163 (42.33%), Query Frame = 1 Query: 94 QGGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVD 570 Q G G A G G G + + E F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET CYI +++ + P Q YYGRGP+Q++WN NY G+ +G D Sbjct: 56 QSGPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFD 205 HSP 2 Score: 38.5058 bits (88), Expect = 3.077e-19 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWM 641 +++G + PD +A DP +SFK+A+WFWM Sbjct: 200 KNIGFDGLRDPDKVAQDPTISFKTALWFWM 229
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 5.225e-19 Identity = 55/162 (33.95%), Postives = 74/162 (45.68%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLN 579 G S CG G G D G + I+++E F D + + C + FYT F+EA A+P FG + RKREIAA+FA HET +A YC Q + +Y+GRGP+QL+WN NY+ G+ L D LN Sbjct: 19 GNSYDYCGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNK----------EYFGRGPMQLSWNYNYIDAGKELHFDGLN 169 HSP 2 Score: 35.8094 bits (81), Expect = 5.225e-19 Identity = 10/20 (50.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 582 PDLLATDPVLSFKSAIWFWM 641 PD++ DP++SFK+++WFW+ Sbjct: 171 PDIVGRDPIISFKTSLWFWI 190
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.254e-18 Identity = 50/158 (31.65%), Postives = 68/158 (43.04%), Query Frame = 1 Query: 118 GSGAVCGERDTGHGTDGGELG---KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVD 570 G G G G G GG G + + E F + + + C + FYT +F+ AA ++ F KREIAAFFA HET CYI +++ S P Q YYGRGP+Q++WN NY G+ +G D Sbjct: 64 GGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFD 208 HSP 2 Score: 38.1206 bits (87), Expect = 4.254e-18 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 552 RSLGGGLVEHPDLLATDPVLSFKSAIWFWM 641 +++G + PD +A DP +SFK+A+WFWM Sbjct: 203 QNIGFDGLRDPDRVAQDPTISFKTALWFWM 232
BLAST of FC868630 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.184e-16 Identity = 53/163 (32.52%), Postives = 68/163 (41.72%), Query Frame = 1 Query: 97 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS-DXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVD 570 G CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +CYI ++ S D P Y+GRGPIQL+WN NY G A D Sbjct: 41 GTGEDYCGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFD 190 HSP 2 Score: 31.9574 bits (71), Expect = 2.184e-16 Identity = 10/20 (50.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 582 PDLLATDPVLSFKSAIWFWM 641 P+ ++ D V+SFK+A+W+WM Sbjct: 195 PETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of FC868630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868630 ID=FC868630; Name=FC868630; organism=Citrus clementina; type=EST; length=709bpback to top |