FC868637

Overview
NameFC868637
Unique NameFC868637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_SERP5 (Hydroxyacylglutathione hydrolase OS=Serratia proteamaculans (strain 568) GN=gloB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20
Identity = 56/172 (32.56%), Postives = 81/172 (47.09%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +L+ +       +VDP E + ++E   +               DH GG  +I     G+KVYG      KG  H V +G+   I       ++  P HT GH+++Y        P +F GDT+F AGCG+ FEG+AEQM+ S    L  LP    + C
Sbjct:    1 MNLISIPAFQDNYIWLL-DNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVGGVAQIVARYSGLKVYGPQETADKGANHIVHDGETIEINGQ-KFATIAVPGHTLGHVAFYSA------PYLFCGDTIFSAGCGRLFEGTAEQMFNSF-QQLAQLPDNTLICC 163          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_PSEAE (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa GN=gloB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            ++I  +P   DNY +L+ + T++  AVVDP +  K +EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP   +VYC
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDA-KPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSL-ARLAALPANTRVYC 168          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA8 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain LESB58) GN=gloB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            ++I  +P   DNY +L+ + T++  AVVDP +  K +EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP   +VYC
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDA-KPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSL-ARLAALPANTRVYC 168          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ALISL (Hydroxyacylglutathione hydrolase OS=Aliivibrio salmonicida (strain LFI1238) GN=gloB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20
Identity = 60/167 (35.93%), Postives = 79/167 (47.31%), Query Frame = 3
Query:   42 IPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            IP   DNY +LI         VVDP E   ++   K+               DH GG  ++    P I V G   + +   TH V +GD   +  +   + L    HTKGHI+Y        D  +F GDTLF AGCG+ FEG+AEQM+ SL   L +LP   +VYC
Sbjct:    7 IPAFNDNYIWLI-HNNDNHCVVVDPGEAAPVLACLKEHGLILDAILITHHHHDHIGGVPELVRQFPNINVVGPENEPIPTLTHPVGDGDFVEL-FNEKFMVLGVEGHTKGHIAYI------GDEKLFCGDTLFSAGCGRLFEGTAEQMFHSL-QKLAALPDETEVYC 164          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPA (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Paris) GN=gloB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19
Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M I  I    DNY +  I++       VDP E   II  A+               +DH GG + + +  P  KVYG   + +   TH ++ G    +G+ H ++  L  P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+  +V+C
Sbjct:    1 MTILPISAFSDNYIWTFIDKIAGVLDCVDPGEAGPIIRFAQSNQLTLRTILLTHHHYDHIGGVDLLIKQWPSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHI--LFNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFC 166          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_VIBVU (Hydroxyacylglutathione hydrolase OS=Vibrio vulnificus GN=gloB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19
Identity = 59/172 (34.30%), Postives = 86/172 (50.00%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            ++I  IP   DNY +LI + + +  AVVDP + + ++   +Q               DH GG   +    P + V G   + +   TH VE+GD+  +      L L    HT GHI Y   GK      +F GD LF AGCG+ FEG+A+QM+ SL   L +LP+  +V+C
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDQRCAVVDPGDAKPVLHYIEQHQLTLEAILITHHHNDHIGGVADLVRAFPNVNVVGPKAEPIPTLTHPVEDGDRLELFDET-FLVLGLGGHTLGHIGYVGDGK------LFCGDVLFSAGCGRIFEGTAQQMFDSLNKLL-ALPEETEVFC 164          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_SALTI (Hydroxyacylglutathione hydrolase OS=Salmonella typhi GN=gloB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19
Identity = 56/165 (33.94%), Postives = 83/165 (50.30%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLP 521
            M +  IP  +DNY +++  +  +   +VDP E   +++A                 +DH GG +++ +  P + VYG +    KG TH V +GD   +      L   TP HT GH+ Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP
Sbjct:    1 MNLNSIPAFQDNYIWVLTNDEGR-CVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLP 156          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ERWT9 (Hydroxyacylglutathione hydrolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gloB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19
Identity = 58/173 (33.53%), Postives = 87/173 (50.29%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP L+DNY + + +++ +   +VDP E   ++ A  +               DH GG  ++    P + VYG    + KG    V +GD+  + G    +++  TP HT GHISY+        P +F GDTLF AGCG+ FEG+A+QM++S    L  LP    V C
Sbjct:    1 MNLTSIPALQDNYIWTLNDDSGR-CLIVDPGEAAPVLRAITENQWQPQAILLTHHHHDHVGGVAELLSHYPDLTVYGPQETSHKGANSLVGDGDRIHVLGLDFTIIA--TPGHTLGHISYF------SHPYLFCGDTLFSAGCGRLFEGTAKQMFESF-QKLNQLPDDTLVCC 163          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_EDWI9 (Hydroxyacylglutathione hydrolase OS=Edwardsiella ictaluri (strain 93-146) GN=gloB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19
Identity = 59/173 (34.10%), Postives = 88/173 (50.87%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  +P L+DNY +L+I     +  +VDP     ++    +               DH GG  +I +  P + VYG +    +GCT  V + D  S+ G  +++++L  P HT GH++YY        P +F GDTLF AGCG+ FEGSA+QM+ SL   +  LP    V C
Sbjct:    1 MDLIGLPTLQDNYIWLLINPQ-HQCLIVDPGVAAPVLHYLTENRITPKAILLTHHHNDHVGGVAEIVQAYPEMPVYGPAETQGQGCTQVVADNDTLSLLGCQISIMAL--PGHTLGHMAYYSA------PYLFCGDTLFSAGCGRLFEGSAQQMFDSL-QRIIQLPDNTLVCC 163          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO22_VIBVY (Hydroxyacylglutathione hydrolase 2 OS=Vibrio vulnificus (strain YJ016) GN=gloB2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19
Identity = 59/172 (34.30%), Postives = 86/172 (50.00%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            ++I  IP   DNY +LI + + +  AVVDP + + ++   +Q               DH GG   +    P + V G   + +   TH VE+GD+  +      L L    HT GHI Y   GK      +F GD LF AGCG+ FEG+A+QM+ SL   L +LP+  +V+C
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDQRCAVVDPGDAKPVLHYIEQHQLTLEAILITHHHNDHIGGVADLVRAFPNVNVVGPKAEPIPTLTHPVEDGDRLELFDET-FLVLGLGGHTLGHIGYVGDGK------LFCGDVLFSAGCGRIFEGTAQQMFDSLNKLL-ALPEETEVFC 164          
The following BLAST results are available for this feature:
BLAST of FC868637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GLO2_SERP57.679e-2032.56Hydroxyacylglutathione hydrolase OS=Serratia prote... [more]
GLO2_PSEAE7.679e-2035.63Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_PSEA87.679e-2035.63Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_ALISL7.679e-2035.93Hydroxyacylglutathione hydrolase OS=Aliivibrio sal... [more]
GLO2_LEGPA1.003e-1932.95Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_VIBVU1.310e-1934.30Hydroxyacylglutathione hydrolase OS=Vibrio vulnifi... [more]
GLO2_SALTI1.310e-1933.94Hydroxyacylglutathione hydrolase OS=Salmonella typ... [more]
GLO2_ERWT91.310e-1933.53Hydroxyacylglutathione hydrolase OS=Erwinia tasman... [more]
GLO2_EDWI91.310e-1934.10Hydroxyacylglutathione hydrolase OS=Edwardsiella i... [more]
GLO22_VIBVY1.310e-1934.30Hydroxyacylglutathione hydrolase 2 OS=Vibrio vulni... [more]

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Properties
Property NameValue
Genbank descriptionC31002H09EF AbioticL1 Citrus clementina cDNA clone C31002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868637 ID=FC868637; Name=FC868637; organism=Citrus clementina; type=EST; length=542bp
TTCGTGCACTTTCCCAGAGAATAAAAATGAAAATCTTTCATATTCCTTGT
TTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAGC
TGCAGTTGTTGATCCAGTGGAGAGAGAGAAGATCATTGAGGCTGCCAAAC
AACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGAC
CATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGGT
GTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAA
ATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCAC
ACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAGA
GGGAGAAGACCCATCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGTT
GTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGC
GTAACATTGGGCTCATTACCTCAGCCAAATCAAGTTTACTGT
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