FC868637

Overview
NameFC868637
Unique NameFC868637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP7 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gloB PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.766e-24
Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY + ++ E      +VDP E   ++ A ++               DH GG ++++E  P I VYG +    KG T  V +GD+ SI  H +     TP HT GHI YY       +P +F GDT+F  GCG+ FEG+AEQMYQS  + + +LP+   + C
Sbjct:    1 MNLISIPAFQDNYIW-VLSENNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVGGVKQLREKFPSIVVYGPAETQDKGVTQVVGDGDRLSILGH-DFSIFSTPGHTLGHICYY------SEPYLFCGDTMFSGGCGRLFEGTAEQMYQSF-MKINALPEETLICC 163          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP8 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 8801) GN=gloB PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.766e-24
Identity = 63/175 (36.00%), Postives = 92/175 (52.57%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGK-EGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M+I  +P L DNY +L+ +  T+ AAVVDP E   ++E   +              +DH G N ++++  P + +YGGS D   + G    ++ GD+   G  V  + L  P HT+ HI+YY   K   E   +F GDTLF  GCG+ FEG+  QM  SL   L +LP   +V+C
Sbjct:    1 MEIKRLPALSDNYIFLLYDADTQTAAVVDPAEPTPVLECLNKLGAQLVAIFNTHHHYDHVGANNQLQQYFPNLCIYGGSEDRGRIPGQQVFLKEGDRVEFGQRVGEV-LFVPGHTRAHIAYYFPPKLSQETGELFCGDTLFGGGCGRLFEGTPTQMVNSL-TKLRNLPDNTRVWC 173          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP3 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae (strain 342) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.935e-24
Identity = 61/172 (35.47%), Postives = 90/172 (52.33%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY + ++ E      +VDP E   ++ A ++               DH GG ++++E  P I VYG +    KG T  + +GD+ SI  H +     TP HT GHI YY       +P +F GDT+F  GCG+ FEG+AEQMYQS  + + +LP+   + C
Sbjct:    1 MNLISIPAFQDNYIW-VLSENNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVGGVKQLREKFPSIVVYGPAETQDKGVTQVLGDGDRLSILGH-DFSIFSTPGHTLGHICYY------SEPYLFCGDTMFSGGCGRLFEGTAEQMYQSF-MKINALPEETLICC 163          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_GLOVI (Hydroxyacylglutathione hydrolase OS=Gloeobacter violaceus GN=gloB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.935e-24
Identity = 64/174 (36.78%), Postives = 89/174 (51.15%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  +  L+DNY +++ +E  + AAVVDP E   ++EA  +               DH GGN ++ E  PGI VY    D   + G T ++E+GD  + G       +  P HT GHI+Y+  G       +F GDTLF  GCG+ FEG+A QM  SL   L  LP   QV+C
Sbjct:    1 MLVHRLNALKDNYVFVLEDEAARTAAVVDPAEARPVLEALVRLGLKLVAIFNTHHHHDHVGGNRELLEAYPGIAVYASRRDRGRIPGQTVELEDGDTVAFGCE-RARVIFVPGHTHGHIAYHFAGCG----HLFCGDTLFAGGCGRLFEGTARQMQHSL-GRLRELPGETQVWC 168          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ANASP (Hydroxyacylglutathione hydrolase OS=Anabaena sp. (strain PCC 7120) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.139e-24
Identity = 63/175 (36.00%), Postives = 93/175 (53.14%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPS-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M++  +  L DNY +L+ +     AAVVDP E E +++   Q               DH GGN+K+ +  P +KVYGG+ D  +    QV  + GD+      V  + +  P HT+ HI+YY   +  + P  +F GDTLF  GCG+ FEG+  QM +SL   L SLP+  +V+C
Sbjct:    1 MQVIRLAALSDNYIFLLHDSHKNIAAVVDPAEAEPVLKQLAQLKAELVAIFNTHHHNDHVGGNQKLIQKFPQVKVYGGAKDQGRIPGQQVFLQPGDRVQFADRVAEV-IFVPGHTRAHIAYYFPPQTDDTPGELFCGDTLFAGGCGRLFEGTPAQMVESL-TKLRSLPENTRVWC 173          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2M_ARATH (Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana GN=GLX2-1 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 8.766e-24
Identity = 66/174 (37.93%), Postives = 91/174 (52.30%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSL--DNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            +KI  +PC +DNYAYL+ +E T    VVDP E   +IEA  +               DH GGN ++KE   G KV G ++  D + G    +++ DK+    H  V  L TP HT+GHIS+Y  G      ++FTGD ++   CG   EG+ EQM  SL   + SLP    +YC
Sbjct:   78 LKIELVPCSKDNYAYLLHDEDTGTVGVVDPSEAAPVIEALSRKNWNLTYILNTHHHDDHIGGNAELKERY-GAKVIGSAVDKDRIPGIDILLKDSDKWMFAGH-EVRILDTPGHTQGHISFYFPG----SATIFTGDLIYSLSCGTLSEGTPEQMLSSL-QKIVSLPDDTNIYC 244          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.145e-23
Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 3
Query:   24 KMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            ++ I   PCL DNY +LI +  + E A +D  + + I+  A Q              +DHAGGNE I+ +  G KV     D   + G + +VE+GD  S+G H      +TP HT GH+ Y++      D   F GDTLF  GCG+ FEG+  +M+ SL   L +LP   ++YC
Sbjct:    3 ELLIRQFPCLSDNYGFLIHDPDSGETATIDTPDADVILNEADQAGWSITQIWNTHHHFDHAGGNETIQALT-GAKVVAPRYDRHRIPGISMEVEDGDVISLGDH-KAKVFYTPGHTMGHVCYHMP----MDGIAFVGDTLFALGCGRLFEGTPAEMWHSLS-RLAALPDETRIYC 170          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_PELUB (Hydroxyacylglutathione hydrolase OS=Pelagibacter ubique GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.495e-23
Identity = 65/179 (36.31%), Postives = 94/179 (52.51%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIG-------AHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M+I  I CL+DNY+YLI+++    A V+DP E + +I+  +               +DH GGN+++KE       YG S+   KG   ++   D   +G        +      H P HT GHI +Y   +E    SVFTGDTLF  GCGK FEG+  QMY SL + + +LP+  ++YC
Sbjct:    1 MEIQIIRCLQDNYSYLIVDKAKNIACVIDPSEAKPVIKYLEDKNIHLKYILNTHHHYDHVGGNKELKEK------YGASVIGYKGDKDRIPEID-ILVGDQDIWHEENFQAKIFHIPGHTLGHICFYFYNEE----SVFTGDTLFSLGCGKIFEGTYSQMYNSL-MKIKALPEKTKIYC 167          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: PNKD_MOUSE (Probable hydrolase PNKD OS=Mus musculus GN=Pnkd PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPS-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTL 509
            +K+  IP L DNY+YLII+     A  VDP +   +  + ++              WDH+GGN  +       +VYG   D +   TH + + D  S+G  + + +L TP HT+GH+ Y + G+  + PS +F+GD LF++GCG+ FEG+AE M  SL   L
Sbjct:  119 VKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVL 279          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_SYNP6 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gloB PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 65/177 (36.72%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSL--DNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDP--SVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M+I  +P L+DNY +L+++   ++AAVVDP E E ++ A +                DH GGN ++    P   V   ++  D + G T  +E GD+  I G    V  L  P HT+GHI+YY       +P  ++F GDTLF  GCG+ FEG+  QM  SL   L SLP    +YC
Sbjct:    1 MRIDCLPALQDNYIFLLVDVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHVGGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEV--LFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSL-QQLRSLPDDTAIYC 174          
The following BLAST results are available for this feature:
BLAST of FC868637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GLO2_KLEP71.766e-2436.05Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]
GLO2_CYAP81.766e-2436.00Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_KLEP33.935e-2435.47Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]
GLO2_GLOVI3.935e-2436.78Hydroxyacylglutathione hydrolase OS=Gloeobacter vi... [more]
GLO2_ANASP5.139e-2436.00Hydroxyacylglutathione hydrolase OS=Anabaena sp. (... [more]
GLO2M_ARATH8.766e-2437.93Hydroxyacylglutathione hydrolase 1, mitochondrial ... [more]
GLO2_MARMM1.145e-2336.00Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]
GLO2_PELUB1.495e-2336.31Hydroxyacylglutathione hydrolase OS=Pelagibacter u... [more]
PNKD_MOUSE1.953e-2335.80Probable hydrolase PNKD OS=Mus musculus GN=Pnkd PE... [more]
GLO2_SYNP61.953e-2336.72Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31002H09EF AbioticL1 Citrus clementina cDNA clone C31002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868637 ID=FC868637; Name=FC868637; organism=Citrus clementina; type=EST; length=542bp
TTCGTGCACTTTCCCAGAGAATAAAAATGAAAATCTTTCATATTCCTTGT
TTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAGC
TGCAGTTGTTGATCCAGTGGAGAGAGAGAAGATCATTGAGGCTGCCAAAC
AACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGAC
CATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGGT
GTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAA
ATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCAC
ACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAGA
GGGAGAAGACCCATCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGTT
GTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGC
GTAACATTGGGCTCATTACCTCAGCCAAATCAAGTTTACTGT
back to top