FC868646

Overview
NameFC868646
Unique NameFC868646
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12949 contig Ccv1_Contig12949:87..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 73/182 (40.11%), Postives = 107/182 (58.79%), Query Frame = 3
Query:  192 TMKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE--PSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            T KA+ILVGG   GTR RPL+L VPK L   A KPMI H IEA   V  + E++L   +Q  V+  F+ E   +L + I    E + LGTAG L   RD +++      FVL+SD+   +P  ++++FHK HG   +IM T+++    ++YG +V +E T ++  + EKP+ FV   IN G+
Sbjct:    5 TTKAIILVGGPSKGTRFRPLSLDVPKLLFPIAGKPMIYHHIEACSKVENMKEIILIGFFQESVLSKFISETSKQLNVAIRYINEEKVLGTAGGLYHFRDIILEGGPSEIFVLHSDICCAFPLNDLLQFHKQHGRSCTIMGTEIESAYANQYGCLVRDEKTAELLHYAEKPETFVSNLINCGV 186          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28
Identity = 75/184 (40.76%), Postives = 103/184 (55.98%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP   LN FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV SE+P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP  FV   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALNSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVSMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVANRDTQEVLHYVEKPGTFVSDIINCGI 185          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28
Identity = 74/184 (40.22%), Postives = 105/184 (57.07%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP E + +FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV SE+P   M++FHK HGG  S ++        +   YG +V+   T +V  +VEKP  FV   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVPMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVSNGDTQEVLHYVEKPGTFVSDIINCGI 185          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.785e-27
Identity = 73/184 (39.67%), Postives = 103/184 (55.98%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP E + +FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV S +P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP  FV   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSAFPLVPMLDFHKQHGGSQSYVILGTTANRSQSLNYGCIVANGETQEVLHYVEKPGTFVSDIINCGI 185          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.977e-27
Identity = 77/184 (41.85%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEAL-KAVGVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSK----YGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  K   + E++L   YQP   LN FL   +    I I   QE   LGT G +   RD+++    + FFV+N+DV SE+P  EM++F K HG   S ++       K    YG +V  E T +V  +VEKP  FV   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACSKLPNMKEILLIGFYQPNEELNRFLSCAQQDFKISIRYLQEYAALGTGGGIYHFRDQILSGGPDAFFVMNADVCSEFPLPEMLDFQKEHGDTYSFVILGTTANRKQSLNYGCIVENEQTDEVLHYVEKPGTFVSDIINCGI 185          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.860e-27
Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++    E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP  F+   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGI 183          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++  + E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP  F+   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGI 183          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++  + E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP  F+   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGI 183          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++    E FFVLN+DV S++P + M++ H+       ++ T  +  +   YG +V    T +V  +VEKP  F+   IN GI
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFTPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLDAHRLQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGI 183          
BLAST of FC868646 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.743e-26
Identity = 74/184 (40.22%), Postives = 99/184 (53.80%), Query Frame = 3
Query:  195 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHG----GEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGKQINAGI 722
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP   LN F+   + +  I I   QE   LGT G +   RD+++      FF++N+DV SE+P  EM++FH+ HG    G          +   YG +V    T +V  FVEKP  FV   IN GI
Sbjct:    2 LKAIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACAQVPDMKEIMLIGFYQPNDELNRFIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFPLLEMLQFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHETNEVLHFVEKPSTFVSDIINCGI 185          
The following BLAST results are available for this feature:
BLAST of FC868646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
GMPPA_DICDI2.491e-2940.11Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
GMPAA_XENLA1.615e-2840.76Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]
GMPAB_XENLA3.597e-2840.22Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
GMPPA_XENTR1.785e-2739.67Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAA_DANRE3.977e-2741.85Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_MOUSE8.860e-2740.11Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_PAPAN1.157e-2640.11Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_HUMAN1.157e-2640.11Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPPA_RAT1.974e-2639.56Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPAB_DANRE5.743e-2640.22Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]

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Properties
Property NameValue
Genbank descriptionC31003A06EF AbioticL1 Citrus clementina cDNA clone C31003A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868646 ID=FC868646; Name=FC868646; organism=Citrus clementina; type=EST; length=725bp
GAGATAATATGTATAAATAAACAACCAATCAGCTTGTTATCTCAGACAAC
AAAAGCAAAGCAAAAGCGAAGCGCGCGAAGCTCGCCTCATCCGTTGACTG
AGCTGTCGGTCCCGAGTCACGACTCGCGACTCTTGTTTTTGAACTCAGTT
GTTTGCCGTTCGGATCCGGTCTTAATTAAAGGCTCCGTATCACAATGAAG
GCACTTATTCTTGTTGGAGGGTTCGGAACACGGTTGAGGCCGTTGACGCT
TAGTGTCCCTAAGCCACTTGTTGAATTTGCTAACAAACCCATGATCCTGC
ATCAGATAGAGGCCCTTAAGGCAGTTGGAGTGACTGAAGTAGTTTTGGCT
ATTAACTACCAGCCAGAGGTGATGTTGAACTTTTTGAAGGAATTTGAAGC
AAAGCTTGGGATCAAGATCATCTGCTCACAAGAGACTGAGCCACTGGGCA
CTGCTGGTCCTCTGGCTCTGGCTAGAGACAAATTGATTGACGATACTGGT
GAGCCATTTTTCGTCCTTAACAGTGATGTTATTAGTGAGTACCCATTTGC
AGAAATGATTGAATTCCACAAAGCACATGGAGGAGAGGCCTCCATCATGG
TAACCAAGGTGGATGAGCCATCAAAATATGGTGTGGTGGTTACGGAAGAG
TCTACTGGAAAAGTTGAGAAATTCGTTGAGAAACCTAAATTATTTGTTGG
TAAACAAATTAATGCTGGAATTNAT
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