FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CLOD6 (Glycogen synthase OS=Clostridium difficile (strain 630) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39
Identity = 95/219 (43.38%), Postives = 134/219 (61.19%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA--EGFTG 667
            IN+MKAGI  +D ++TVSP YA E+ +    G +LD ++RK    +KGI+NG+D    +P  DK I V YD  ++ + K   K  LQ  +GL  D +IP+IG + RL  QKG D++A  +P  ++E++QI+VLGTG+   +      +  + +K      FN  LA  I A +D  L+PS FEPCG+ Q+ AMRYG++PIV  TGGL DTV     FTG
Sbjct:  202 INFMKAGINFADKIITVSPTYANEIQTSF-YGEQLDGLLRKESGKLKGILNGIDYDLNDPAKDKDIFVHYDVDSI-NKKVENKLRLQDILGLKKDSSIPLIGIVSRLVSQKGFDLIAYMMPELMREDLQIVVLGTGEHQYQSMFNYYDSNFSDKVSARITFNASLAQQIYAASDMFLMPSLFEPCGIGQMLAMRYGSLPIVRETGGLRDTVTPYNKFTG 418          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHORT (Glycogen synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQEL---VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA 652
            ++ +KAGI+ +  V TVSP YA E+   V G+  G+E     R   + GI+NG+D   WNP TD Y+    D +     K + K+ L+  +GL  D + P+ G + R   QKG D++ AA+P  I    Q+ +LG G   +E  L  +   YP  A     ++  LAH+I   ADF+L+PSRFEPCGL QL+A+RYGT+P+V  TGGL D+V+
Sbjct:  201 VSTLKAGIVYAQAVATVSPSYAAEIKTPVGGQ--GLEGLLQARAGDLSGILNGIDSNAWNPQTDPYLAAPIDGADPAPGKRINKDMLKRRMGLDADGDRPLFGLVSRFVAQKGIDLVVAALPGMIAGGAQVAILGAGDTGLEAALNDIVGRYPGAAAVHVGYDEHLAHLIEGAADFLLVPSRFEPCGLTQLYALRYGTIPVVRRTGGLADSVS 411          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 90/211 (42.65%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N +K GIL +D V TVSP YA+E+ + E  G  L++I++     + GI+NG+D   +NP  D  I   +     +  K  +K  LQ   GLP++ N+P+IG + RL  QKG D++ + +   ++ENVQI++LGTG   +E+        YP+K      F+I  A  I AG+DF L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTV
Sbjct:  201 LNMLKTGILYADRVNTVSPTYAKEIQTSEF-GCGLESILQYVDGKVSGILNGIDYDIYNPENDILIPYHFSEEE-LSGKGQMKAELQKRTGLPLNPNVPLIGMVSRLTNQKGFDLVLSQLEKVLEENVQIVLLGTGFPEIEEGFRYFSQKYPDKLSANIAFDIQFAQEIYAGSDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTV 409          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_HAEPS (Glycogen synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 89/213 (41.78%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQEL---VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +I+++KAG+  +D V  VSP YA+E+   ++G      L   + +  ++GI+NG+D   WNP TD  I   Y  +  M  K   K  LQ   GLP D++  +   + RL EQKG+D L A I   ++ NVQ++VLG+G   +E  L   +  YP K      ++  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  194 EISYLKAGLFYADRVTAVSPTYAREITEQIAGAGMHGLLQQRLAEGALRGILNGVDDTVWNPETDTNIVANYRPN-YMQGKGKNKSELQRYFGLPEDKDALLFVMVTRLTEQKGADFLLARIDQIMQHNVQLVVLGSGSPDLEWALRDAQSRYPHKIGLKIGYDEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTV 405          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 87/211 (41.23%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++R  +  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E++Q++VLGTG    E+   Q+   YP K      F+ PLAH I AGAD  L+PS FEPCGL Q+ A+RYGT+PIV  TGGL DTV
Sbjct:  198 VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTGDWRFEQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLMPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTV 406          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 86/212 (40.57%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            K+N +K  IL +D++ TVS  Y +E+++ E  G  LD ++  RK  + G++NG+D + WNP TD+ I   +        K   K+ALQ  +GL +  +IP++G + RL EQKG D+L A +P   K  +Q+++LGTG +   K L++   L  +       F+  LA  I AG+D  L+PSR+EPCGL Q+ A+RYG VP+V  TGGL DT+
Sbjct:  201 KVNLIKGAILTADVINTVSETYCREILTPES-GDGLDGVLTLRKNDLYGVLNGIDYEHWNPATDRGISKNFTPGAPA-GKAANKKALQKRLGLEIAEDIPLVGMVSRLTEQKGLDLLEALLPRIAKAKLQLVLLGTGDEKYLKLLQEFAALGTDNVSVNIGFHPELAPQIYAGSDIFLMPSRYEPCGLGQMIALRYGAVPVVRKTGGLADTI 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBA (Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 93/233 (39.91%), Postives = 137/233 (58.80%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------AEGFTGFQMGSFSVD 694
            + +MK  I  SDM+ TVS  YA+E+ + E  G  LD ++R+    ++GI+NG+D  E+NP  D  I   YD + + D K   K  LQ+E+GL V+ NIP+I  + RL  QKG D+L       ++ ++Q++++GTG K  E   + L+  Y  K     +F+  LAH + A +D  L+PS FEPCGL QL A+RYG++PIV  TGGL DT+        EG  GF   +++ D
Sbjct:  199 VGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDNLINKNYDVNNIND-KYENKRNLQSELGLNVNENIPIIAMVTRLTSQKGLDLLVNISERLLQNDIQLVIVGTGDKHYEDHFKWLDYKYGNKVSANIRFDNNLAHKVYAASDMFLMPSLFEPCGLGQLIALRYGSIPIVRETGGLKDTIRAYNEYTGEG-NGFSFYNYNAD 428          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BACLD (Glycogen synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 89/212 (41.98%), Postives = 131/212 (61.79%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH-FIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            IN+MK GI+ +D V TVSP Y  E+++    G  L+ ++  +K  + GI+NG+D   ++PL D +I   YDA    D K   K  +Q   GLPV+ +IP+I  + RL +QKG D++   +   F +E++Q+IVLGTG+   E     +E  +P++ +    F+ PL+  I A +D  L+PS+FEPCGL QL A+RYG VP+V  TGGL DTV
Sbjct:  198 INYMKGGIIAADQVTTVSPTYRDEILTPY-YGERLEGVLSDKKDALTGILNGIDDVLYDPLNDPHIDYHYDAVN-RDGKRKNKAVIQKTFGLPVNEDIPLISMVARLTKQKGFDLIKRVLHELFEEEDMQLIVLGTGEAEFENYFRYMEHAFPDRCKAYIGFHEPLSRKIYAASDLFLMPSKFEPCGLGQLIALRYGAVPVVRETGGLHDTV 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.572e-39
Identity = 88/215 (40.93%), Postives = 135/215 (62.79%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            K++++K GI  +D + TVSP YA+E+++ + +G  LD ++  R   + GI+NG+D +EW+P  D+++  +Y A   +  K   K ALQ    LP    IP++G +GR+  QKG D+L  AA P       Q++V+G+G   +E+    L   YPE       ++ PLAH + AGAD  ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV +
Sbjct:  200 KLSFIKGGIGFADHITTVSPSYAREILTPQ-QGFGLDGLLNHRAGVLTGILNGVDYREWDPGKDRHLVARYSADD-LSGKARCKAALQHHFKLPCHSGIPLLGHVGRMVAQKGVDLLLKAAEPLLAAGEAQLVVVGSGDATLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVD 412          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_STRMU (Glycogen synthase OS=Streptococcus mutans GN=glgA PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.572e-39
Identity = 92/230 (40.00%), Postives = 133/230 (57.83%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------AEGFTGFQMGSFS 688
            +NWMKA +L +D V TVSP YA+E+++ E  G  LD I+R     + G+VNG+D   ++P TD ++ V +     +  K   K ALQ  VGLPV  ++P++G + RL +QKG  ++   +   ++ ++QI++LGTG    E         YP+K      F++ LA  I A +D  L+PS FEPCGL Q+ AMRYGT+P+V   GGL DTV       +  TGF    FS
Sbjct:  198 LNWMKAAVLYADRVTTVSPSYAKEIMTPEF-GKGLDQIMRMESGKLSGVVNGIDTDLFDPETDPHLAVHFSKDD-LSGKAKNKAALQERVGLPVREDVPLVGIVSRLTDQKGFQLVVDQLNTMMQLDLQIVLLGTGYADFENAFAWFGHAYPDKMSANITFDLELAQQIYAASDIFLMPSAFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVIPYNEFEKTGTGFGFQDFS 425          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CLOD61.508e-3943.38Glycogen synthase OS=Clostridium difficile (strain... [more]
GLGA_RHORT1.969e-3940.85Glycogen synthase OS=Rhodospirillum rubrum (strain... [more]
GLGA_LACLA1.969e-3942.65Glycogen synthase OS=Lactococcus lactis subsp. lac... [more]
GLGA_HAEPS1.969e-3941.78Glycogen synthase OS=Haemophilus parasuis serovar ... [more]
GLGA_GEOTN1.969e-3941.23Glycogen synthase OS=Geobacillus thermodenitrifica... [more]
GLGA_GEOSF1.969e-3940.57Glycogen synthase OS=Geobacter sp. (strain FRC-32)... [more]
GLGA_CLOBA1.969e-3939.91Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_BACLD1.969e-3941.98Glycogen synthase OS=Bacillus licheniformis (strai... [more]
GLGA_THISH2.572e-3940.93Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_STRMU2.572e-3940.00Glycogen synthase OS=Streptococcus mutans GN=glgA ... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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